Protein Info for RALBFv3_RS09690 in Ralstonia solanacearum IBSBF1503

Annotation: dienelactone hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 334 signal peptide" amino acids 1 to 36 (36 residues), see Phobius details PF01738: DLH" amino acids 98 to 330 (233 residues), 63.6 bits, see alignment E=2.1e-21 PF00326: Peptidase_S9" amino acids 126 to 207 (82 residues), 25 bits, see alignment E=1.3e-09

Best Hits

KEGG orthology group: None (inferred from 97% identity to rsc:RCFBP_21390)

Predicted SEED Role

"FIG00555821: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (334 amino acids)

>RALBFv3_RS09690 dienelactone hydrolase family protein (Ralstonia solanacearum IBSBF1503)
MRPQRAVMRPVRHASRALSRGLVAALLAASALACTQPMPDAGDAQPDLPTARAPSATVLG
VQTVQIPRSAMKDAGDAPQTLTAYWIAPGRKGPAAGAPVVVALHGCGGLYTPAGADAHAL
GERYRGYAQWLAAHGYAVVLPDSFGPRGKPHGICTEPTAGRSITGTVRRADILATLRWVA
AQPGLDARRIVLLGWSNGAQAVLDTVDASRAWPADTPAVERAVAFYPGCLAALQRPAYQL
NAPLLLLAGANDDWTPADRCQALQTAVLARQPQARFELELFSGAYHGFDGTAPIKQRQGI
PNGVRHGAVTVGGDPAAREAAFTRLAAWLDNPHP