Protein Info for RALBFv3_RS06200 in Ralstonia solanacearum IBSBF1503

Annotation: cell division protein ZapD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 252 PF07072: ZapD" amino acids 16 to 226 (211 residues), 274.4 bits, see alignment E=3.5e-86

Best Hits

Swiss-Prot: 99% identical to ZAPD_RALSO: Cell division protein ZapD (zapD) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: None (inferred from 99% identity to rso:RSc2829)

Predicted SEED Role

"FIG002842: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (252 amino acids)

>RALBFv3_RS06200 cell division protein ZapD (Ralstonia solanacearum IBSBF1503)
MILYEYPFNERIRTLLRLEDLFERLDFFLAQEHPLQHHVALTTLFEIVDVAGRADLKSDL
LKELDRQRQTLTVLRSNPQIDQEALDAVIAELETASGNLTATHGKAGQLIADNEWLTSIR
SRAIIPGGTCEFDLPAYFAWQHHPGERRRADIVKWAQPLVPLRDATMIVLRLLRESGQSG
KVIANAGSYQQMLSGRIYQLMQVRLDEAALGFIPEISANKYMLWVRFTQQDGDLRPKPVD
ADIPFQLKLCNF