Protein Info for RALBFv3_RS05645 in Ralstonia solanacearum IBSBF1503

Annotation: glycosyl transferase family 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 428 transmembrane" amino acids 338 to 360 (23 residues), see Phobius details amino acids 379 to 395 (17 residues), see Phobius details PF12000: Glyco_trans_4_3" amino acids 58 to 222 (165 residues), 218.9 bits, see alignment E=7.3e-69 PF00534: Glycos_transf_1" amino acids 240 to 410 (171 residues), 71.5 bits, see alignment E=1.3e-23 PF13692: Glyco_trans_1_4" amino acids 245 to 396 (152 residues), 58.3 bits, see alignment E=2.2e-19 PF13524: Glyco_trans_1_2" amino acids 348 to 414 (67 residues), 25.2 bits, see alignment E=3.1e-09

Best Hits

KEGG orthology group: None (inferred from 88% identity to rsl:RPSI07_0810)

Predicted SEED Role

"Probable glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (428 amino acids)

>RALBFv3_RS05645 glycosyl transferase family 1 (Ralstonia solanacearum IBSBF1503)
MRADSSQPYQPVHATEGPGIGKRHPAQPQSPGASVLFIHQNFPGQFRHIAADLAQSPGWR
VLAIGRDTAPGMPGVQLIRYRPHRTVRAETHHYLRSYEDGVLHGQAVLRILLDLKAKGYR
PDIIVAHPGWGESLFAKEAFPDAKLVHFCEYYYHTKGADADFDPEFPLSVDNAARIRARN
ALHLLNLEQCDLGITPTHWQHQLHPQAYRDKIVVAHEGIPVEQLGPDPNATLTLPNGTTL
RAGEPIVTYVARNLEPHRGFHQFMRALPIILREHASCQVVIVGGDGVSYGNPPTDAANWR
EKLLRENPVDLNRVHFLGKVPYETYKRVLQVSAAHVYLTYPFVLSWSMLEAMACGCLVIG
SRTAPVEEVLRHGENGLLVNFFNPVEISCCILSVLSSSEKYSRLREVARKSVSRYSLVEG
VNLYRMLL