Protein Info for RALBFv3_RS04525 in Ralstonia solanacearum IBSBF1503

Annotation: prolipoprotein diacylglyceryl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 303 transmembrane" amino acids 19 to 39 (21 residues), see Phobius details amino acids 59 to 79 (21 residues), see Phobius details amino acids 99 to 116 (18 residues), see Phobius details amino acids 129 to 147 (19 residues), see Phobius details amino acids 206 to 224 (19 residues), see Phobius details amino acids 230 to 248 (19 residues), see Phobius details amino acids 267 to 287 (21 residues), see Phobius details TIGR00544: prolipoprotein diacylglyceryl transferase" amino acids 4 to 291 (288 residues), 283 bits, see alignment E=1.3e-88 PF01790: LGT" amino acids 9 to 285 (277 residues), 269.4 bits, see alignment E=1.3e-84

Best Hits

Swiss-Prot: 95% identical to LGT_RALSO: Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase (lgt) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K13292, phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC: 2.-.-.-] (inferred from 98% identity to rsc:RCFBP_11016)

MetaCyc: 54% identical to phosphatidylglycerol--prolipoprotein diacylglyceryl transferase (Escherichia coli K-12 substr. MG1655)
RXN0-20 [EC: 2.5.1.145]

Predicted SEED Role

"Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)" (EC 2.4.99.-)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.-.-.-

Use Curated BLAST to search for 2.-.-.- or 2.4.99.- or 2.5.1.145

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (303 amino acids)

>RALBFv3_RS04525 prolipoprotein diacylglyceryl transferase (Ralstonia solanacearum IBSBF1503)
MLIHPQFDPVALHLGPLAIRWYGLMYLAAFIMFLWFGRLRTRQSHIAAQGWRGSDLDDML
FYGVLGVILGGRLGYVLFYKPDWYLAHPLDIFKVWEGGMAFHGGFLGVVLAMVLYARMRR
RPWTQVTDFIAPMVPCGLAAGRLGNFINGELWGRVASPDLSWAMLFPQAQGEDRAWLASH
AQQAVASGVQAVFDQYHMLPRHPSQIYQFLGEGVLFFILLWLYARKPRPMGAVSGMFLIG
YGVFRFAAEFAREPDNFLGLLALNLSMGQWLSLPMILAGAAMLAWAYRRAGRNGNDAQAS
AHA