Protein Info for RALBFv3_RS03525 in Ralstonia solanacearum IBSBF1503

Annotation: EamA/RhaT family transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 308 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 47 to 68 (22 residues), see Phobius details amino acids 84 to 106 (23 residues), see Phobius details amino acids 113 to 130 (18 residues), see Phobius details amino acids 137 to 157 (21 residues), see Phobius details amino acids 164 to 185 (22 residues), see Phobius details amino acids 197 to 216 (20 residues), see Phobius details amino acids 228 to 250 (23 residues), see Phobius details amino acids 258 to 278 (21 residues), see Phobius details amino acids 284 to 301 (18 residues), see Phobius details PF00892: EamA" amino acids 19 to 153 (135 residues), 49.9 bits, see alignment E=1.9e-17 amino acids 166 to 301 (136 residues), 63.2 bits, see alignment E=1.4e-21

Best Hits

KEGG orthology group: None (inferred from 99% identity to rsc:RCFBP_11209)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (308 amino acids)

>RALBFv3_RS03525 EamA/RhaT family transporter (Ralstonia solanacearum IBSBF1503)
MTTASSTSSASTRSADTGGLLLASVGAVLFSAKAIVAKLMYRYQVDAVMVITLRMLLAAP
IFLAMGWWQSRRSAPLAPADRWRIVGLGIIGYYLSSFLDFLGLQYITAGLERLILFLTPS
FVLLITATVFKRRIVGLQWLSMAIAYAGIVLVFAHDLNLGGRHVWLGAGLVLASAISYGI
YLLASGELVKRVGSMRLVAYAMCVSTVACIVQFLVLRPVSALVLPWQVYGLSAINSVFCT
VAPVTLTMMAVARVGAPVASQAGMIGPVSTLLLGWWLLGEPITLWQIGGSALVLAGMALL
SRRGTQSN