Protein Info for RALBFv3_RS03030 in Ralstonia solanacearum IBSBF1503

Annotation: CDP-diacylglycerol--serine O-phosphatidyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 291 transmembrane" amino acids 45 to 64 (20 residues), see Phobius details amino acids 70 to 88 (19 residues), see Phobius details amino acids 109 to 128 (20 residues), see Phobius details amino acids 134 to 152 (19 residues), see Phobius details amino acids 164 to 184 (21 residues), see Phobius details amino acids 196 to 217 (22 residues), see Phobius details amino acids 228 to 244 (17 residues), see Phobius details amino acids 250 to 269 (20 residues), see Phobius details PF01066: CDP-OH_P_transf" amino acids 47 to 205 (159 residues), 73.4 bits, see alignment E=1.4e-24 TIGR00473: CDP-diacylglycerol-serine O-phosphatidyltransferase" amino acids 55 to 191 (137 residues), 111.7 bits, see alignment E=1.7e-36

Best Hits

KEGG orthology group: K00998, phosphatidylserine synthase [EC: 2.7.8.8] (inferred from 99% identity to rsc:RCFBP_11316)

Predicted SEED Role

"CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.7.8.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (291 amino acids)

>RALBFv3_RS03030 CDP-diacylglycerol--serine O-phosphatidyltransferase (Ralstonia solanacearum IBSBF1503)
MPAFNRRKKRFTASNVMHLRPLRHNQPRSDDDELEAVRPRRRRGIYLLPNAFTTAALFAG
FFAIVQAMNLNFETAAIAIFAAMVLDGMDGRVARITNTQSAFGEQYDSLSDMCSFGVAPA
LVMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGVVDKRFFQGMPSPAAAALIAGF
VWLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVL
FVVVSSDPPVALFGLFVGYAVSGYLLWGWRTVHGQAGSPRLPRDTAPDADE