Protein Info for RALBFv3_RS01355 in Ralstonia solanacearum IBSBF1503

Annotation: trigger factor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 449 PF05697: Trigger_N" amino acids 1 to 143 (143 residues), 126.8 bits, see alignment E=1.3e-40 TIGR00115: trigger factor" amino acids 12 to 425 (414 residues), 419.7 bits, see alignment E=6.1e-130 PF00254: FKBP_C" amino acids 167 to 249 (83 residues), 59.1 bits, see alignment E=7e-20 PF05698: Trigger_C" amino acids 273 to 426 (154 residues), 142 bits, see alignment E=2.7e-45

Best Hits

Swiss-Prot: 96% identical to TIG_RALSO: Trigger factor (tig) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K03545, trigger factor (inferred from 99% identity to rsc:RCFBP_11667)

Predicted SEED Role

"Cell division trigger factor (EC 5.2.1.8)" in subsystem Bacterial Cell Division (EC 5.2.1.8)

Isozymes

Compare fitness of predicted isozymes for: 5.2.1.8

Use Curated BLAST to search for 5.2.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (449 amino acids)

>RALBFv3_RS01355 trigger factor (Ralstonia solanacearum IBSBF1503)
MSTVIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQ
QVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELKTEGVSDDQVAFDATFEVYPEVTLGD
LAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGEHGDGGEAVAQNGDRVTVDFV
GTIDGVEFAGGKAEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFPADYHGKDVAGK
TAEFTVTLKQVEWAHLPEINEAFAQSLGIADGSLDKMRADIRENLEREVKRRTHALLKDQ
VMDALLKVAELDVPKSLVEQDQERLVEMARRDLEARGMPNVKSMPIPAEMFAQQAERRVK
LGLVLAEVVKANGLEAKPEQVKAEIEEFAKSYEDPKEVIRWYYGDQQRLAEMEAYVLENN
VVNFVCDKAKVTDKAMSFEELTAAPAAQG