Protein Info for Psyr_5087 in Pseudomonas syringae pv. syringae B728a

Annotation: Acyltransferase 3

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 627 transmembrane" amino acids 7 to 24 (18 residues), see Phobius details amino acids 31 to 51 (21 residues), see Phobius details amino acids 72 to 91 (20 residues), see Phobius details amino acids 141 to 158 (18 residues), see Phobius details amino acids 165 to 183 (19 residues), see Phobius details amino acids 189 to 211 (23 residues), see Phobius details amino acids 220 to 238 (19 residues), see Phobius details amino acids 244 to 261 (18 residues), see Phobius details amino acids 281 to 300 (20 residues), see Phobius details amino acids 306 to 324 (19 residues), see Phobius details amino acids 344 to 364 (21 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 5 to 318 (314 residues), 99.5 bits, see alignment E=2e-32 PF19040: SGNH" amino acids 408 to 618 (211 residues), 89.6 bits, see alignment E=2.7e-29

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_5087)

Predicted SEED Role

"O-antigen acetylase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZL58 at UniProt or InterPro

Protein Sequence (627 amino acids)

>Psyr_5087 Acyltransferase 3 (Pseudomonas syringae pv. syringae B728a)
MDFRKDINGLRAIAVIAVLLFHFHPDWLPGGFAGVDVFFVISGYLITGIILRGLRSGKFR
LAAFYTSRARRIVPALAALCFALLLLGWFALLPLDYSALGTHVASSLGFVSNVVYWREAG
YFTASAHEKWLLHTWSLSVEWQFYLLYPIALLMLSRFVALHNLRWWILGASLAGFVVCIP
ASSQWPEAAFYLLPTRAWELLAGGVACLFPLQLKALQQRALEHIGLTLIVAGFFLLSVQD
TWPGYLVLMPVLGTFAVIIAARNDSLLTCNPLAQWTGTRSYSLYLWHWPVVVWMNDAGLL
GETRTVLVGIGVAVTLGLVSWRLIEQPVSRPLSDQRSRRATFGALIALLFVGGALVSATG
GAVSPLRPVSVSDKARFIQDYADRQHNLYEPYWLKCDAFSALTQRGQSGIDEACTRKQGV
GGVFLWGDSHAQALSLGLRTLLTRNTPFYQVASASCLPGLSDHQGRTSATSRACDYSNRT
ALQGIEKLRPDIVVIAQKDGHDKTDWTQIATRLKGFGVKHIVLIGPVPQWNPSLPSVIAN
RHWGLSESHIRDPALDQSIMLVDQAARNLAASAGIQFVSLIDKLCIADACLVRLEDNRSL
LQIDSGHLSAEGSLYVVRNYVLPQLVN