Protein Info for Psyr_4573 in Pseudomonas syringae pv. syringae B728a
Annotation: Histidine triad (HIT) protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 60% identical to HINT1_BOVIN: Histidine triad nucleotide-binding protein 1 (HINT1) from Bos taurus
KEGG orthology group: K02503, Hit-like protein involved in cell-cycle regulation (inferred from 94% identity to ppw:PputW619_4775)MetaCyc: 50% identical to purine nucleoside phosphoramidase (Escherichia coli K-12 substr. MG1655)
3.9.1.-
Predicted SEED Role
"Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)" (EC 3.6.1.17)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.6.1.17
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q4ZML9 at UniProt or InterPro
Protein Sequence (112 amino acids)
>Psyr_4573 Histidine triad (HIT) protein (Pseudomonas syringae pv. syringae B728a) MDTLFTKIINREIPAKIIYEDDQVLAFHDIAPQAPVHFLVIPKKPIRTLNDLTEEDKGLA GHILFTAQRLALELGCEEGFRVVMNCNELGGQTVYHIHMHVLGQRQMTWPPG