Protein Info for Psyr_4451 in Pseudomonas syringae pv. syringae B728a

Annotation: UreE urease accessory, N-terminal:UreE urease accessory, C-terminal

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 166 PF02814: UreE_N" amino acids 9 to 65 (57 residues), 61 bits, see alignment E=6.3e-21 PF05194: UreE_C" amino acids 72 to 146 (75 residues), 98.2 bits, see alignment E=2.7e-32

Best Hits

Swiss-Prot: 100% identical to UREE2_PSEU2: Urease accessory protein UreE 2 (ureE2) from Pseudomonas syringae pv. syringae (strain B728a)

KEGG orthology group: K03187, urease accessory protein (inferred from 100% identity to psb:Psyr_4451)

Predicted SEED Role

"Urease accessory protein UreE" in subsystem Urea decomposition

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZMZ1 at UniProt or InterPro

Protein Sequence (166 amino acids)

>Psyr_4451 UreE urease accessory, N-terminal:UreE urease accessory, C-terminal (Pseudomonas syringae pv. syringae B728a)
MLVIHDRIEPQAEWAAELHLNFEARSKSRLRCFSAENEDVGLFLQRGQSPLRDGEFLQAQ
DGRVVRVCARPEKLMHVTCSSTFELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLDQ
LGATVETIEAPFQPEHGAYGGGHHHSRAGEEDFNYPPRMHQFGVRK