Protein Info for Psyr_4071 in Pseudomonas syringae pv. syringae B728a

Annotation: Phosphoesterase, PA-phosphatase related protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 246 transmembrane" amino acids 15 to 34 (20 residues), see Phobius details amino acids 71 to 88 (18 residues), see Phobius details amino acids 100 to 120 (21 residues), see Phobius details amino acids 155 to 173 (19 residues), see Phobius details amino acids 185 to 204 (20 residues), see Phobius details amino acids 210 to 229 (20 residues), see Phobius details PF01569: PAP2" amino acids 100 to 231 (132 residues), 75 bits, see alignment E=2.4e-25

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_4071)

Predicted SEED Role

"PAP2 superfamily protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZP21 at UniProt or InterPro

Protein Sequence (246 amino acids)

>Psyr_4071 Phosphoesterase, PA-phosphatase related protein (Pseudomonas syringae pv. syringae B728a)
MSKTVAPPYSRSINPWIYLGIPVAVALILMLLELTSLDMDIAKLAFDPVSGQFIGRHSYF
LEDVLHDRAKQLVMVFGAVATIGFAASFKVERLIPWRRELGCLVLSMALSTAFVTPVKVV
TSVQCPWSLKEFGGQETYSELLSPRPATDKPGRCWPGGHAATGFTLFALFFALRDRRPRM
AKTGLALAFGLGTVFSVGRMLQGAHFFSHNIWTAVFCWLICLGVYYFVLYRPEPKGLENS
KVQPTH