Protein Info for Psyr_3722 in Pseudomonas syringae pv. syringae B728a

Annotation: Amino acid adenylation

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3000 3500 4000 4500 5000 5500 6000 6676 transmembrane" amino acids 1716 to 1733 (18 residues), see Phobius details amino acids 1745 to 1761 (17 residues), see Phobius details PF00668: Condensation" amino acids 15 to 454 (440 residues), 234.3 bits, see alignment 6.4e-73 amino acids 1061 to 1505 (445 residues), 363 bits, see alignment 5.6e-112 amino acids 2149 to 2588 (440 residues), 147.7 bits, see alignment 1.2e-46 amino acids 3204 to 3650 (447 residues), 357.6 bits, see alignment 2.4e-110 amino acids 4274 to 4720 (447 residues), 356.6 bits, see alignment 5e-110 amino acids 5342 to 5788 (447 residues), 354.5 bits, see alignment 2.1e-109 PF00501: AMP-binding" amino acids 475 to 815 (341 residues), 290 bits, see alignment 6.3e-90 amino acids 1526 to 1874 (349 residues), 341.6 bits, see alignment 1.4e-105 amino acids 2608 to 2955 (348 residues), 315.7 bits, see alignment 1e-97 amino acids 3671 to 4025 (355 residues), 297.1 bits, see alignment 4.4e-92 amino acids 4741 to 5090 (350 residues), 293.8 bits, see alignment 4.4e-91 amino acids 5809 to 6157 (349 residues), 331.2 bits, see alignment 1.9e-102 TIGR01733: amino acid adenylation domain" amino acids 496 to 890 (395 residues), 441.8 bits, see alignment 6.7e-136 amino acids 1547 to 1949 (403 residues), 480.2 bits, see alignment 1.5e-147 amino acids 2629 to 3030 (402 residues), 456.9 bits, see alignment 1.8e-140 amino acids 3692 to 4100 (409 residues), 447.4 bits, see alignment 1.3e-137 amino acids 4762 to 5165 (404 residues), 437.7 bits, see alignment 1.2e-134 amino acids 5830 to 6232 (403 residues), 481.9 bits, see alignment 4.6e-148 PF13193: AMP-binding_C" amino acids 874 to 950 (77 residues), 29.9 bits, see alignment (E = 2.2e-10) amino acids 1933 to 2009 (77 residues), 34.3 bits, see alignment (E = 9.6e-12) amino acids 3014 to 3089 (76 residues), 39.9 bits, see alignment (E = 1.6e-13) amino acids 4084 to 4159 (76 residues), 38.9 bits, see alignment (E = 3.4e-13) amino acids 5149 to 5224 (76 residues), 44.4 bits, see alignment (E = 6.7e-15) amino acids 6216 to 6291 (76 residues), 36 bits, see alignment (E = 2.8e-12) PF00550: PP-binding" amino acids 979 to 1039 (61 residues), 52 bits, see alignment (E = 1.8e-17) amino acids 2038 to 2099 (62 residues), 47.5 bits, see alignment (E = 4.4e-16) amino acids 3118 to 3179 (62 residues), 57.2 bits, see alignment (E = 4.1e-19) amino acids 4188 to 4249 (62 residues), 56.5 bits, see alignment (E = 7e-19) amino acids 5253 to 5314 (62 residues), 57.3 bits, see alignment (E = 3.7e-19) amino acids 6320 to 6381 (62 residues), 53 bits, see alignment (E = 8.6e-18) PF00975: Thioesterase" amino acids 6406 to 6526 (121 residues), 88.4 bits, see alignment (E = 2.1e-28)

Best Hits

Predicted SEED Role

"Non-ribosomal peptide synthetase modules, pyoverdine??" in subsystem Siderophore Pyoverdine

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZQ18 at UniProt or InterPro

Protein Sequence (6676 amino acids)

>Psyr_3722 Amino acid adenylation (Pseudomonas syringae pv. syringae B728a)
MTSSHQHVSNNSNVSYELSSVQQGVWLGQIANSDIPLYNIGMTLEIKGDLDIPMFEKAIK
LVAKHNDALRLALFQDGDIARQRVLPSVDITLALVDFSDYGDSVERAQEYLQHAFSRPFN
PLEGILWEAQLVRCSASRHYWLGRYHHLVMDGAGVTLFCHAVEKAYNNLLVGIDAFEEGP
SYSDFLAKDQAYLNSPRLERDRLFWRERYAHIPPSLLQWSGDHAVGSMCKSGHIRSTIKR
DLFNAVAAVATEHGLSPVTVFFAVVSAYFSRVGGAEEVIIGMPLHNRTTARQKQTIGMFS
SVIPVGVRVDPNRSLLELMGDVAAELRRCYRHEHFPIAELNRALNIGHSRRKQIFDITLS
FEKFDADFVFGGAPSKAIRMYSGFDQTPLSIAICDYYSDEDVVVDFNFNLACFRPDEVER
IRDRITLLLESVAAHESTPIGQLALMGKAERRQVLVEFNATHQALQQDLLVHQLFEQQAQ
QQPQALALVCGDERVTYADLNERSNQLADVLLSLGIAPDDRVAICVERSVEMVAGLLGIL
KAGGAYVPLDPGYPPERLRYMLEDSAPMAVLVQRTTRDLLGALAMPVLDLQSVNRAAEAE
HDCVLPTVAPQHLAYVIYTSGSTGQPKGVMIEHRNLVNLVAWHCEAFNLTHRKRVSSVAG
VGFDACVWELWPALCVGASLSLLPGQALGNDVDALLGWWRRQELDVSFLPTPIAEIAFAQ
GIEPASLQTLLIGGDRLRQFPNPDSRVALINNYGPTETTVVATSGLIDATQSVLHIGRPI
ANTQVYLLDAHGQPVPIGVSGEIYIGGAGVARGYLNRPELTAERFLDDPFSAEPEARMYR
SGDLGRWLADGNIEYLGRNDDQVKLRGVRIELGEIEAQLRQIADIRDAVVIAQEDTPGEK
RLTAYYTMQEAAQAITAQTLRAALQARLPEYMVPAAYVKLSEWPLTPNGKLDRRALPAPG
DDAYASRDYEAPAGEVERALADIWQELLGVDRAGRNDHFFELGGHSLLAMRLISLVRQRL
NVELELAALFAHPQLEALACVVAQAQNNTLPQIVQTSREARLPLSFAQQRLWFLAQMEGA
SAAYHIPAGLRIVGALDEAALQRALNRIVARHEVLRTTFVQTGDQAVELCIHPEETGCPL
RKYDLTTHADSSSELARLMDEEAVGRFDLQQGPLIRGSLVRLGDQEHVLLLTMHHIVSDG
WSMGVLTRELGALYASGCQAEADPLPQLSIQYADYAVWQRGWLSGAVLHKQSTYWQTALL
DAPALLMLPSDRVRPAQQDYTGDAVPVVLDATLSHELKALSRRHGTTLFMTLLAGWATVL
SRLSGQDEVVIGSPVANRMSAEVEGLIGFFVNTLALRVNVSNDPTVETLLSRVKACTLAA
YEHQDLPFEQVVELLKPVRSLSHSPLFQAMLSWQNTPPAELALAGLELTLLDSVARTTKY
DVSLDLAEVEGRIVGSLEYATALFDRETAQRYVAYLERVLRAMVENERQVVGAIELLGET
ERRQVLVEFNATHHAWQQDLLVHQLFEQQAQQQPQALALVCGNERVTYADLNERSNQVAD
VLLSLGIAPDDRVAICVERSVEMVVGLLGILKAGGAYVPLDPGYPPERLRYMLEDSAPVA
VLVQRTTRDLLGALAMPVLDLQSVNRAAEARHDRVLPTVTPQHLAYVIYTSGSTGQPKGV
MIEHRAIVNRLLWAQDQYRLSREDRVLQKTPFGFDVSVWEFFLPLLAGAQLVIARPGGHQ
DPEYLAGLIADSGVTILHFVPSMLQSFLNQAGPLACSTLRQVFCSGEALPYSLQKHFEQR
FAHVQLHNLYGPTEAAVDVTYWHCVPDLHAGIVPIGRPVANTRMYLLDPHMQPVPVGVCG
EIYIAGIQLARGYLNRAALTAERFVKDRFSNDPTARMYRSGDLGRWLADGNIEYLGRNDD
QVKLRGFRIELGEIEAQLAGCPGVGEAVVIAREDTPGDKRLIAYYTTREAKETIAVQTLR
AALQASLPEYMVPAAYVKLPGWPLTPNGKLNRRALPVPEADAYVSRGYEAPCGTVETALA
EIWQELLGVERVGRHDHFFELGGHSLLAVSLMGRMRQAGLSADVRMLFAQPTLSAFAEVL
GNGHQVEVPANGIVVGCTRITPSMLPLADLSEDAIERIVRAVPGGTANVQDIYALAPLQE
GVLFHHLASVEGDPYLLNTRFALPSEDHLKAFVRALQGVIARHDILRTAVLWEGLDEPVQ
TVWREAPLAVEALALKAADGDIEQQLQERFDPRHFRLDLTKAPLMKMAYAYDEANSRWVA
ILLFHHMVLDHMALEVVQHEVQADLLGQAAGLPDSVPYRNHVAQARLGVSQAAHEAFFQE
MLGQVTEPTLPFGLHDVQGDGRDIKQARQAVSADLAGRIRRQARSLGVSAASLHHLAWAQ
VLGRTSGREDVVFGTVLLGRMQGGDGADRSLGMFINTLPLCLNVGEQGVREGVKATHARL
TALLGHEHASLALAQRCSAIAPPLPLFSALLNYRHSAEPQVSEQGDRAWGGIEVLGWNER
TNYPLTLAVDDLGEGFALTVQATAGIDPQRVCAYMETALESLVDALEHSPESLLRSLEML
PRSERQLLQEWNATAVDYPQGACVHQLFEAQVEKTPEAIALVFEARTFTYAQLNARANQL
AHHLIGLGIGPDDRVAICVERSPEMVVGLLGILKAGAAYVPLDPAYPEQRLRYMLEDSAP
AAVLVQSATRALPGELAVPLLDLEGGCCEAEADHDPVARAVKPDHLAYVIYTSGSSGQPK
GVLIEQRGFLNLMHWYLAELKLASDDAVLLVSSYSFDLTQKNILGPLLVGGTLHLAREAF
IPEVLLEQIQRERITHINLSPSAFNTLIDANDSRQLDSIRRVVLGGEPIQVARLEMLPEP
RPEFINSYGPTECSDVVAWHRLDDDIDCYRSSVFPIGRPIANTRIYLLDAHGQPVPIGVS
GEIHIGGAGVARGYLNLPELTAERFLDDPFSAEPAARMYRSGDLGRWLADGNIEYLGRND
DQVKIRGFRIELGEIESQLAACPGVREAVVLVREHRPGDKRLVAYLTAREGAVLSAAQLR
EQLSQGLAEYMIPSAFVTLARFPLTPNGKLDRRALPAPEDDAYASRDYEAPAGAVEHALA
QIWQTLLGLERVGRHDHFFELGGHSLLAVQLVSRLRQRFEVEVALRDVFAEPTLQGLARQ
VANARLSAQTPLTLLTPVDRNLPLPLSWAQQRLWFLDQLDRAAGAAYHIPAGLRLRGRLD
SDALQATLDRIVARHEALRTHFALHEGQAIQVIAPETQGFALASHDLRALDSAAQHEAVE
RLAREEALAPFDLSSGPLIRGRLVQLSQTEHILLVTQHHIVSDGWSTGVLLHEIGTLYRA
FSQGLADPLPALAFQYVDYAAWQRQWLQGETLHTQVEFWRQHLSGAPALLELPTDHRRPP
LRSYAGGRVSLALSPALTAGLRQLGQRHGATLFMTLLVGWSSLLSRFSGQDDVVIGTPVA
NRPRSELESLIGFFVNTLALRIRPQGGLSVAALLEQVKAVMLAAHAHQDLPFEQVVEALQ
PPRSLGHSPIFQVMLALNNTPGGGELSLPELSLEPLQAPHTTAQFDLSLALVEADGGLIG
SLEYASDLFERATIERIAGHLQVLLEGMVADDQQAVAELPLLSCEQRRQVLESFNDTAAA
YPAEKLLHQLFEEQAAQQPDALAVVDETASLTYGELNARANRLAHYLIGLGIQPDDRVAI
CAQRSLEMVVGLLGILKAGGAYVPLDPGYPPERLRYMLEDSAPVAVLVQEALQECLPAVN
VPQVVLDSVVLSSGTGGLPCGNPDLDALGLTSRMPAYVMYTSGSSGVPKGVLIEHRSVLR
LVINNPYARITTEDCVAHGANTAFDASTWEIWSALLNGAKLLVVSQATLLNPARLNHVLI
EGGVTALWLTAGLFNEYVDVLAVAFSKLRYLLVGGDVLDPVSVAKVLSRAHRPRHLINGY
GPTETTTFASTYEIHALSDNSRSIPIGRPIGNTRIYLLDAHGQPVPIGVSGEIHIGGAGV
ARGYLNLPELTAERFLDDPFSAEPAARMYRSGDLGRWLADGNIEYLGRNDDQVKLRGFRI
ELGEIESQLAACPGVREAVVLVREHRPGDKRLVAYLTAQEGALLSAAQLREQLSQGLAEY
MIPSAFVTLARFPLTPNGKLDRRALPAPEDDAYASRGYEAPAGEIEHALAEIWQALLGLE
RVGRHDHFFELGGHSLLAVQLVSRLRQRFEVEVALRDVFAEPTLQGLARQVANARLSAQT
PLTSLTPVDRDLPLPLSWAQQRLWFLDQLDRAAGAAYHIPAGLRLRGRLDSEALQATLER
IVARHEALRTHFALHEGQAIQVIAPETQGFALASHDLRALDSAAQHEAVERLAGEEALAP
FDLSSGPLIRGRLVQLSQTEHILLVTQHHIVSDGWSTGVLLHEIGMLYRAFSQGLADPLP
ALAFQYVDYAAWQRQWLQGETLQTQVDFWRQHLSGAPALLELPTDHRRPPLRSYAGGRVS
LALSPALTAGLRQLGQRHGATLFMTLLVGWSSLLSRFSGQDDVVIGTPVANRPRSELESL
IGFFVNTLALRIRPEGHLSVAALLEQVKAVMLAAHAHQDLPFEQVVEALQPPRSLAHSPI
FQVMLALNNTPGGGELSLPELSLEPLQAPHTTAQFDLSLALVEADGGLIGSLEYASDLFE
RATIERMAGHLQVLLEGMVADDQQSVAELPLLSCEQRRQVLESFNDTAAAYPADKLIHQL
FEEQAAQQPDALAVVDDAASLTYGELNARANRLAHYLIGLGIQPDDRVAICAQRSLEMVV
GLLGIFKAGGAYVPLDPAYPEQRLRYMLEDSAPVAVLVQTETRRLLGELAVPTLDLQEGD
WEVEPEHNPVVPAITPQHLAYVIYTSGSTGKPKGVGGPHQAMVNRLYWMHNTFGGQRLEK
HAQKTSISFLDSVTETLMPLLFGAQLHIVSPLASRDPLQLWQAVTEHQLTRLVLVPSLLE
ELSRIENRQVSPEKRLIVCSGEVFSSSLLARTRAWLPSATILNFYGSSEAAGDSTFYLCD
SAVQAGHSLPIGRPIANTRIYLLDAHGQPVPIGVSGEIHIGGAGVARGYLNMPELTAERF
LDDPFSAEPTARMYRSGDLGCWLADGNIEYLGRNDDQVKLRGFRIELGEIESQLAACPGV
REAVVVAREHRPGDKRLVAYLTAQEGAVLSAAQLREQLSQGLAEYMIPSAFVTLARFPLT
PNGKLDRRALPTPKDDAYASRGYEAPAGEIEHALAEIWQTLLGLERVGRHDHFFELGGHS
LLAVQLVSRLRQRFEVEVALRDVFAEPTLQGLARQVANARLSAQTPLTSLTPLTPVDRNL
PLPLSWAQQRLWFLDQLDRAAGAAYHIPAGLRLRGRLDSDALQATLDRTVARHEALRTHF
ALHEGQTIQVIAPDTQGFALASHDLRALDSAAQHEAVQQLAGEEALAPFDLSRGPLIRGR
LVQLSETEHILLVTQHHIVSDGWSTGVLLHEIGTLYRAFSQGLADPLPALAFQYVDYAAW
QRQWLQGETLHTQVEFWRQHLSGAPALLELPTDHRRPLLRSYAGGRVSLALSPALTAGLR
QLGQRHGATLFMTLLVGWSSLLSRFSGQDDVVIGTPVANRPRSELESLIGFFVNTLALRI
RPQGHLSVAALLEQVKAVMLAAHAHQDLPFEQVVEALQPPRSLGHSPIFQVMLALNNTPG
GGELSLPELSLEPLQAPHTTAQFDLSLALVEADGGLIGSLEYASDLFERATIERMAGHLQ
VLLEGMVADDQQAVGELPLLSCEQRRQVLESFNDTAATYPAGTLLHQLFEEQVAQQPDAL
AVVDDAGSLTYGELNARANRLAHYLIGLGIQPDDRVAICAQRSLEMVVGLLGILKAGGAY
VPLDPGYPPERLRYMLEDSAPVAVLVQGETRTLLGELAVRTLDLQEGDWEVEPEHNPVVP
AITPQHLAYVIYTSGSTGKPKGVANQHDGVVNRLWWAQSEYRIGADDRVLQKTPFGFDVS
VWEIFLPLLAGAQLVMARPGGHQDPHYLMEVIERRSISMLHFVPSMLQAFVNQTPAGRCS
TLKRVLCSGEALPHALLLQGQAHFPKSELHNLYGPTEAAIDVTAWHYVAEQDIGIVPIGR
PIANTQIYLLDAHGQPVPIGVSGEIHIGGIGVARGYLNRPELTAERFLEDPFSTEPAARM
YRSGDLGRWLADGNIEYLGRNDDQVKLRGYRIELGEIESQLAGCPGVREALVLAREHCPG
DKRLVAYLTAQEGAVLSAAQLREQLSQGLAEYMIPSAFVTLTHFPLTPNGKLDRRALPAP
EDDAYASRGYEAPVGEIEHALAEIWQALLGLERVGRHDHFFELGGHSLLAVQLVSCLRQR
FEVEVALGDLFMHPTICELAASCHSGLNKALHPNLTTLRKEGAQHPLFLIHEGSGDIGYA
QQLAKQIPSDIPVYGFSASGLQSGEEHLTTIEAMASRYIEGIRHIQPQGPYRVAGWSAGG
TIAYEIAHQLTGAGATVEFLGLVDTTSDYRHLFDAQEGGYAHLDERPDFDEIEALLRLLP
PDVRQGPVRHLAAARDFEALLAYTQVQGLLPEGIESDLAKRYLALIRSIGLALYRYRPPA
LPVRVTLFSAMGENRSDISIGWEALMPKEQLQVISIMGTHHSMVKEPDIRELGRAILEAV
TNKGRASQTRLSLETV