Protein Info for Psyr_3506 in Pseudomonas syringae pv. syringae B728a

Annotation: Sulfatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 677 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 62 to 82 (21 residues), see Phobius details amino acids 94 to 115 (22 residues), see Phobius details amino acids 144 to 163 (20 residues), see Phobius details amino acids 182 to 199 (18 residues), see Phobius details amino acids 221 to 237 (17 residues), see Phobius details PF00884: Sulfatase" amino acids 292 to 580 (289 residues), 136 bits, see alignment E=9.2e-44

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_3506)

Predicted SEED Role

"Sulfatase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZQN4 at UniProt or InterPro

Protein Sequence (677 amino acids)

>Psyr_3506 Sulfatase (Pseudomonas syringae pv. syringae B728a)
MSWLQSRRLHYWLGAVMVVFLLSALLRGVFFYGFSGIEPGTLFTHGEVAQTLGIGLRFDL
RLALLILLPVAVLLWLPGWNLISVRALRWLARGYLIVTLAILTMIYIVDFGHYAYLGVRL
NASVLRYLEDAQISRDMLWQTYPVVWITVGWLLTVAVLGWVLIRLERVTLDREARPIKRW
SAVWGSALMICATFLGLLGRVENLNLENPVPLRWSDAFFSGNSQVAALGLNPALFLYDTL
KVSQSNFDEPQVRKHYEKVARYLGVRQPDVQGLSFKRHQPVQPYRLPGERPPNVMFVMLE
SLGTSAVGAYGNPLNPTPNLDHLATQSWFFKHFYVPVTGTAKTVWASITGVPDVTRQETA
TRHPLLTRQNTIINDFKGYEKLYMIGGNSGWANMNALIRRSIDDVRLYDERDWKSPQVDV
WGISDLDLFKESDRILRALPADKPFFAYVQTAGNHRPFTIPKDNDGFQVSDKTVEQVQAA
GSRSVEQYNAVRLLDFNIGRLMELAKAGGYYENTIFVLFGDHNTRISQIPHMAPAFEQLG
LESNNVPLLIHAPGLLGTRVVDEAVGLADLLPTLAGMAGMDFTSGTMGRDIQQAAPEGER
VVPLVLREGTFPLIGGVTRNYLLQMEHDGSSPTLHDLSSPTPLDNVAEQNPQEFERLRDL
TRGLHETSRMMLYQNVR