Protein Info for Psyr_3491 in Pseudomonas syringae pv. syringae B728a

Annotation: Major facilitator superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 473 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 41 to 61 (21 residues), see Phobius details amino acids 73 to 91 (19 residues), see Phobius details amino acids 97 to 119 (23 residues), see Phobius details amino acids 131 to 154 (24 residues), see Phobius details amino acids 160 to 181 (22 residues), see Phobius details amino acids 203 to 224 (22 residues), see Phobius details amino acids 236 to 256 (21 residues), see Phobius details amino acids 264 to 284 (21 residues), see Phobius details amino acids 290 to 313 (24 residues), see Phobius details amino acids 325 to 347 (23 residues), see Phobius details amino acids 354 to 371 (18 residues), see Phobius details PF07690: MFS_1" amino acids 11 to 296 (286 residues), 76.7 bits, see alignment E=1.6e-25 amino acids 287 to 377 (91 residues), 36.6 bits, see alignment E=2.6e-13 PF00083: Sugar_tr" amino acids 39 to 158 (120 residues), 23.3 bits, see alignment E=3e-09

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_3491)

Predicted SEED Role

"Transporter, MFS superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZQP9 at UniProt or InterPro

Protein Sequence (473 amino acids)

>Psyr_3491 Major facilitator superfamily (Pseudomonas syringae pv. syringae B728a)
MRQIWKSFRALYFASLMMLIGSGLLSTYLALRLAADQVDSLWVGALMAANYFGLVLGGKI
GHRLIGRVGHIRAYATCAGIVGAAVLGHGLISWLPAWLVLRVIVGLGMMCQYMVIESWLN
EQAAAKQRGMVFSGYMIASYLGLVLGQLVLVVHPQLGPELLMLVALCFALCLVPVAMTRA
IHPAPLHPAPLEPRFFMKRVPQSLTAVLGAGLIIGSFYGLAPVYAAEQGLSTEQVGLFMG
CCILAGFLVQWPLGLLSDRYDRSVLMRIFAAALVVASLPLAVFPSVPVEVLFGVGFLASL
MQFCLYPLAVAFANDHVEAERRVSLTAMLLMTYGIGASIGPLAAGVVMKLFGGHMLYAFV
CGAGVILVLLIRPKAVTHLHQVENAPLHHVAMPDSMSSSPLVVALDPRVDEQVVQEQMQA
TVEPEPEADPEVVSEAEAEAESEVLAQSEPAAGAETTEADEHERERESETWKA