Protein Info for Psyr_3137 in Pseudomonas syringae pv. syringae B728a

Annotation: ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 449 PF13514: AAA_27" amino acids 1 to 53 (53 residues), 26.8 bits, see alignment 1.3e-09 PF13476: AAA_23" amino acids 7 to 197 (191 residues), 45.3 bits, see alignment E=5.9e-15 PF02463: SMC_N" amino acids 26 to 359 (334 residues), 42.2 bits, see alignment E=2.3e-14 PF13304: AAA_21" amino acids 204 to 352 (149 residues), 62 bits, see alignment E=3.4e-20 PF13175: AAA_15" amino acids 253 to 351 (99 residues), 32.1 bits, see alignment E=3.4e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_3137)

Predicted SEED Role

"ATP binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZRQ3 at UniProt or InterPro

Protein Sequence (449 amino acids)

>Psyr_3137 ATPase (Pseudomonas syringae pv. syringae B728a)
MEIKSFKLVNVGRFSDLEVALAPTENHASKVTVLVGNNGAGKTTLLESLSTLLTWLIARI
RSERGAGKKVALERIKNNADFSEVSILLSESFPFADRAQFGWQLSSVRPGRKVESRTNLI
HLALLADGYRTLLTDSGATSLPLIAYYPAERSVVDIPLEAPFRPPYRQLDGYEDALSRGV
DFRQFFEWFRDREDRENENGVSSDTLMRAQQKHGPDSIEYEVLLRLNESSRDRELTAVRS
AIYAFMPAFANLRVRRQPQAHMTIDKHGETLNVLQLSQGEKSMMALVGDIARRLAMMNPA
LENPLQGNGIVLIDEVDLHLHPKWQRSLIAQLTTTFPNCQFLLTTHSPLVISDSKDVLVY
VMDDGELREQDSLYGLDANQVLSSVMDTGIRNEAVQTCLDEMQHFLIRGELDEARTLYGV
LADQLPADHIELARASLLIRKLEIRREKD