Protein Info for Psyr_2772 in Pseudomonas syringae pv. syringae B728a

Annotation: Fibronectin, type III

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1194 PF09327: DUF1983" amino acids 1037 to 1118 (82 residues), 97.1 bits, see alignment 2.5e-32

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_2772)

Predicted SEED Role

"Phage tail fiber protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZSR1 at UniProt or InterPro

Protein Sequence (1194 amino acids)

>Psyr_2772 Fibronectin, type III (Pseudomonas syringae pv. syringae B728a)
MGAALKIDIRGEKGGSSSPKSPTEASDSLRSTNLAKLLIAVGEGEFEGTPTASDIYLDNT
PINDASGNVNFQNVKWEWRTGSVDQSYIPGIPSIDNETTVNVELRNDSPWVRSITNTQLS
AVRVRLAWPALQKQDDNGVGGYRIEYAIDVATDGGSYKQALLEAVDGKTTTRYERSRRID
LPAATSGWQIRVRRLTANQNTNKIADTMLVAGLTEVIDAKLRYPNTALLYIEFDAEQFTN
IPAVTVKCKARKWQVPSNYDPFTRTYSGVWDGSMKEAWTNNPAWVTYGVCTQDRFGLGKR
IKPWMVDKWELYRIAQYCDQDVPNGVGGVEPRFLCDMNLQGKANAWSLLRDISGIYRGMT
YWAQGQLVAQADMPRSQDFDYVFTRANVIDGKFTYGSASAKTRYTRAIVGYDNPDNNYDT
DVIPFADPVLQRRFGDKPTELTAIGCTRASEGQRRGKWVVMSNNQDRTVSFSTGMEGAIP
LPGYIIPVADSLLAGREIGGRIAGAAGRVVTLDRDTLAKAGDRLIVNLPSGQAEGRTVQS
AAGREITVTVAYSETPTTQLQWALDADDLAIPLYRVLSVKRSAEGEYAITALQYEPSKFS
YIDSGARLEERPISVIPITVVASPASVSLASTTAIAQGLAVTTMTISWPAVAGAVAYDVE
WRKDSGNWIKVQRTGSTSVDITGIYAGAYLARVRAVSAYDISSSWRNSILTQLKGKEGLP
PAVTSLTAASLMFGINLKWTFPPGAEDTQRTEIWYSQTTDLAKATKLSDLAYPQSEHVMQ
GLLAGVTFFFWARLVDRTGNVGPWYPTGAGVMGQTSNDAGAILEMIAGQITETELGQKLL
QKIELIEQLQDQIDALDGLKAYDPKETYEKGQMVVDDGRIYQAERAVPKGTPPPNAVYWD
DVGTLLETANGLAAQVQTHTTEINELNGVVTAQASNMEALRAAYREDDGEGALADALKGY
NSAASIVQEAVTRAAQNEATARTITQLTATVSANTSQVTDLREVVSTNQASTASSLQQLS
ASVASANNAAAQNTAAIQQTATAYADTAGKLSTMWSVKMQVTQDGRYVAAGFGFGIENTE
AGLQSQFLVSADRFAIVNSMAGGAISTPFVAQNGQLFLGPTFIMDGTITNAKIGSFISST
DYVAGQRGWILRKDGTLEINGSGAGGGRLVVTNRSVRVYDINNVKRVQLGDLSE