Protein Info for Psyr_2746 in Pseudomonas syringae pv. syringae B728a

Annotation: L-lysine 6-monooxygenase, putative

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 439 PF13434: Lys_Orn_oxgnase" amino acids 12 to 350 (339 residues), 252 bits, see alignment E=4.5e-79

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_2746)

Predicted SEED Role

"Lysine N6-hydroxylase/L-ornithine N5-oxygenase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZST7 at UniProt or InterPro

Protein Sequence (439 amino acids)

>Psyr_2746 L-lysine 6-monooxygenase, putative (Pseudomonas syringae pv. syringae B728a)
MGNSTPHNLHSNAVCIGFGPAGIALACAFADAREANDPLGTLSVRYLEAAQDSQWHRELL
LAGTDINHHVFRDLVTPRNPRSRFSFAMYLKEHGRMFDFGLLGRPASRHEWSDYLAWVAA
QVDSQTCFNTPVTGIDPVLRHGRLHELRVCTPDTCFTTRNVVLSSGSAPCIPPAFEALIG
PTLFHTSQFLSRLQAFGEHLPKRWLVLGSGQSASESVLELVSRDAGIEVHSVHRSAGFKL
TQLGQFPNRVFAPDHVDYFHSLGPAARQRFLDWSRSTNYAGIDPDESQKLFSLIYEDSIA
GRKRLQTYAYSVISAIEPVAEGYRVELTDTFSQRTQVLEVDAVVLGTGYQQYPIPPLLSG
LQPWLQADVDGGLLIDRDYRVATQGECDVNIWVNGLSERSHGISDSQSFSLMALRAERIA
TALQQAVAPAAEPLLAQWK