Protein Info for Psyr_2697 in Pseudomonas syringae pv. syringae B728a

Annotation: Glycosyl transferase, family 39

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 493 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 73 to 99 (27 residues), see Phobius details amino acids 110 to 127 (18 residues), see Phobius details amino acids 135 to 153 (19 residues), see Phobius details amino acids 160 to 179 (20 residues), see Phobius details amino acids 182 to 202 (21 residues), see Phobius details amino acids 214 to 234 (21 residues), see Phobius details amino acids 269 to 288 (20 residues), see Phobius details amino acids 300 to 318 (19 residues), see Phobius details amino acids 324 to 345 (22 residues), see Phobius details amino acids 367 to 387 (21 residues), see Phobius details PF02366: PMT" amino acids 41 to 229 (189 residues), 49.5 bits, see alignment E=4.4e-17 PF13231: PMT_2" amino acids 61 to 228 (168 residues), 57.6 bits, see alignment E=2e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_2697)

Predicted SEED Role

"Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZSY6 at UniProt or InterPro

Protein Sequence (493 amino acids)

>Psyr_2697 Glycosyl transferase, family 39 (Pseudomonas syringae pv. syringae B728a)
MTSRVLSPLLLLLGAMLFFLALGNHQLQNSTEPRVAGIAMEMHLSGNWVTPKLNDQPFLE
KPPMSVWLDAASIGAFGATLWAVRLASACAGLFSVLLLYSMLRRFGRPASVAWVAAFMLA
TQASFWSNSRQVGEDALLALGVSMALLGFFHASQRLRSDGFPAGAWLLFVVGIALATLSK
GVLGLAMPGVVIFAWLVCESVRSKRIVPVHWLRPAMFTVLALVPLLVWLCFLYGQGGTQS
LKDVLWTNSVGRFSGSFEEAGHYEPVHYYLSKLPEAFLPWNVLVYLGLWHFRKQLLANRY
LLFFSLWLIAQFLLLSLASSKRMVYLMSLAPAAAVIAAEYAFVLGERIKARSQGSASAAF
VLRNRRAMTVAGAVLIVTAYLGAAMWLEPRADRQLSFLPLTDKVHALQVQGRHVVLFQPS
ERLAGASVFYSHSLLDTFTSSAELSTFLTRADGNVALMESLQPPEPPLRMVDSVKVGERI
YYFVTQAPATVGN