Protein Info for Psyr_2584 in Pseudomonas syringae pv. syringae B728a
Annotation: IucA/IucC
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 100% identity to psb:Psyr_2584)MetaCyc: 65% identical to achromobactin synthetase protein D (Dickeya dadantii 3937)
6.3.2.-
Predicted SEED Role
"Achromobactin biosynthesis protein AcsD @ Siderophore synthetase superfamily, group A"
MetaCyc Pathways
- achromobactin biosynthesis (5/8 steps found)
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q4ZT99 at UniProt or InterPro
Protein Sequence (594 amino acids)
>Psyr_2584 IucA/IucC (Pseudomonas syringae pv. syringae B728a) MTNTDRTVLSNMVSELATTRALLNCLIKEFALPEECLHYTWPEGMQGIAPGSFVDGGQWK GIPLTISLPNQQQFFVLVDRRDHLGSHRYLSDVYARQGQGTWRCLAFAEFARQLLTACEH MTRASNDELLDQVLQSQHLTAAIVAHNMTGQHPAPLSGYLASEQGLWFGHPNHPAPKARL WPEHLAQETYAPEFQAQTALHLFEVPLEGLRITSNGLSEAEVMSGFADQSRARPGHALIC MHPVQAQLFMQDRRVQRLLELGDISDLGASGLLASPTASMRTWYIEGHDYFIKGSLNVRI TNCVRKNAWYELESTLIIDELFQRLQQTRPETLGGLSTVAEPGSMSWAPKGVSEADGHWF REQTGAILRENFCRRSGEDCSVMAGTLFARDLRSRPLVHDFLQRFNGAELEDQHLLDWFD EYQALLLSPVMALFFNHGIVMEPHLQNAVLIHDNGRPQQLLLRDFEGVKLTEELGIKAIQ VGLHPRIRQSLLYSREQGWNRITYCLLINNLSEAVLALSWERPHLAPLMWQRVERQLQRI RDELVLPAPELDALIAGQSIACKTNLKVRLAAKADREANYVRLASPWATEARYA