Protein Info for Psyr_2577 in Pseudomonas syringae pv. syringae B728a

Annotation: Amino acid adenylation

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3000 3500 4000 4500 5000 5500 5926 transmembrane" amino acids 1380 to 1397 (18 residues), see Phobius details amino acids 3227 to 3245 (19 residues), see Phobius details amino acids 3289 to 3309 (21 residues), see Phobius details amino acids 3503 to 3521 (19 residues), see Phobius details PF18563: TubC_N" amino acids 3 to 55 (53 residues), 26.4 bits, see alignment (E = 2.4e-09) PF00668: Condensation" amino acids 109 to 530 (422 residues), 142.5 bits, see alignment 6.9e-45 amino acids 1139 to 1580 (442 residues), 353.3 bits, see alignment 7.9e-109 amino acids 2226 to 2653 (428 residues), 145.6 bits, see alignment 8e-46 amino acids 3261 to 3702 (442 residues), 368.3 bits, see alignment 2.2e-113 amino acids 4336 to 4762 (427 residues), 143 bits, see alignment 4.8e-45 PF00501: AMP-binding" amino acids 551 to 892 (342 residues), 245.2 bits, see alignment 4.2e-76 amino acids 1600 to 1951 (352 residues), 321.1 bits, see alignment 3.6e-99 amino acids 2673 to 3016 (344 residues), 271.9 bits, see alignment 3.2e-84 amino acids 3724 to 4060 (337 residues), 246 bits, see alignment 2.5e-76 amino acids 4783 to 5119 (337 residues), 245.1 bits, see alignment 4.5e-76 TIGR01733: amino acid adenylation domain" amino acids 571 to 967 (397 residues), 423.7 bits, see alignment 2e-130 amino acids 1621 to 2026 (406 residues), 467.3 bits, see alignment 1.2e-143 amino acids 2694 to 3091 (398 residues), 433.4 bits, see alignment 2.3e-133 amino acids 3744 to 4135 (392 residues), 423.5 bits, see alignment 2.4e-130 amino acids 4803 to 5194 (392 residues), 417.7 bits, see alignment 1.4e-128 PF13193: AMP-binding_C" amino acids 951 to 1027 (77 residues), 27.8 bits, see alignment (E = 1.6e-09) amino acids 2010 to 2086 (77 residues), 32.6 bits, see alignment (E = 5.2e-11) amino acids 3078 to 3151 (74 residues), 34.1 bits, see alignment (E = 1.7e-11) amino acids 4119 to 4195 (77 residues), 34.2 bits, see alignment (E = 1.6e-11) amino acids 5178 to 5252 (75 residues), 33.1 bits, see alignment (E = 3.7e-11) PF00550: PP-binding" amino acids 1057 to 1119 (63 residues), 39.5 bits, see alignment (E = 2.2e-13) amino acids 2116 to 2177 (62 residues), 42.1 bits, see alignment (E = 3.3e-14) amino acids 3181 to 3242 (62 residues), 46.8 bits, see alignment (E = 1.2e-15) amino acids 4225 to 4286 (62 residues), 46.8 bits, see alignment (E = 1.2e-15) amino acids 5280 to 5343 (64 residues), 55.1 bits, see alignment (E = 2.9e-18) PF00975: Thioesterase" amino acids 5367 to 5620 (254 residues), 93.5 bits, see alignment (E = 9e-30) amino acids 5659 to 5811 (153 residues), 71.2 bits, see alignment (E = 6e-23) PF00561: Abhydrolase_1" amino acids 5659 to 5755 (97 residues), 29.9 bits, see alignment (E = 1.8e-10) PF12697: Abhydrolase_6" amino acids 5660 to 5866 (207 residues), 28.6 bits, see alignment (E = 8.7e-10)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZTA6 at UniProt or InterPro

Protein Sequence (5926 amino acids)

>Psyr_2577 Amino acid adenylation (Pseudomonas syringae pv. syringae B728a)
MSINELLATLKAHEIHLTVKDGQLVVQGNRRALTDNGLLEHLREHKPALIELIEQGDYQN
GKRGAPALPDNGIEQGCERITPEMLTLVKLDQAAIDLLMDAIPGGAANVQDIYPLAPLQQ
GILYHHVSATQGDPYVMQVQFAFSDQARRDAFAEALQSVITRHDILRTSVHWKGLETPVQ
VVWRHAELKVDSSPLAADLTMDLGQAPLMRLVCHAPVAGQRVEATLLFHHIAMDHSALEV
VRHEVQACLSGQADMLGVPVPFRNYVGQALLGVSEAQHEAFFREMLGDLDEPTLAYGLQD
LSGEGDAIEEHSITLDQQLCLRLRAQARTLGISVASLFHLGWARVLAGLAGQSRVVFGTV
LMGRLLGAEATERALGIFINTLPLRLDLAEQGVQAAVRATHQRLTALMRHEHAPLALAQR
CSGVTAPTPLFNALLNYRHSAPAQASGETWQGIEVLQAQERSNYPLVLSVDDLGEAFGLT
AQATAGIDPHSICAYMQWTMESVVDALEQTPQMPVDQLDIVPASERARLLLDFNDRRADY
ERRLTIHQRIEQLAEQQPDAVAAQVGAHHLSYRELNARANALAHHLIGLDVQPDDRVAVV
ARRSLETLVGLLAVLKAGAGYVPVDPAHPDERIAYLLGDSAPVAVLAQPAFVERLQGLGL
AGLNTPLIELDLASWPEQQDNPHIDALDSTHLAYVIYTSGSTGQPKGVMVEHRTLNNLID
WHREAFDLRAGSHTASVAGFGFDAMAWEIWPALCAGATLHLPPAEIGNEQLDALLDWWIA
QPLQVAFLPTPVAEYAFSRNLRHPTLRTLLIGGDRLRQFHRDPGFAVINNYGPTEATVVA
TSGRLLPDGSLDIGKPVANTSIYLLDERQQLVPLGVPGELYIGGDSVARGYLNQPQLTAE
RFVHDSFAGQPQARMYRTGDLARWNADGTLEYLGRNDDQVKIRGVRIELGEIENQFSQLP
GIEEALVLAREDEPGQPRLVGYFTERAGAASSTVEQLRTALLARLPGYMVPGALVRLESW
PLTANGKVDRRALPVPDRTALSTGEYQAPQGDLESALALIWSELLQVERVGRHDRFFELG
GHSLLAMRMVSQVRQRLALELALGDLFADSSLIAVAHCLSAAARSQLPAIDVQPRNGPLP
LSSAQQRIWFMAQMEDANSAYNISLGLKLSGPLDSRALTRALERIVARHDSLRSRFSQED
DNAWVEAAPVTEVPRICWQDLRDQDPQALQAVIREEAAQPFDLQHDLPIRGRLLCLAEDR
HVLLLTVHHIVADGWSLGVLTRELTALYQAFSQGQEDPLPALALQYGDYAVWQRNWLDDE
RLIHQADYWQQTLTGAPVLLTLPTDRPRPAHQDYTGASVALDLDPRLSTDIRAFCQAQSV
TPFMLFMGAWAVLLARLSGQEEVVVGMPVANRRRAEIEGLIGLFVNTLAVRVDTSGEPDV
VTLLERIKARVVEAQDHQDLPFEQVVERLRPPRSLAHSPLFQASLTWDGSQGLELQLGDM
QLEPLDEQAAFAKFDLALSVSDGPDHFRCIVEYATALFDHGTIERHLSYLEAILRAMVAD
SQTVVSHIPLLSEDERRQLTDGFNAPDAVYPQEQTLHSQFEAQAQRTPDAIAVSYEEESW
SYATLNAQANRIAHRLIGMGIGADDRVAICTHRGLQMIAGLLGILKAGAAYVPLDPAYPV
ERLAYTLDDSAPVALLSQRSVQGTLPVSQVPVICLDDDLQDESVCNPQVPVTPGNLAYVI
YTSGSTGKPKGVMIEHRNVARLFSATEEWFGFNQQDVWALFHSFAFDFSVWEIWGALLHG
GHLVIVPQLVSRSPEDFYALLCSTGVTVLNQTPSAFRQLIAAQGENGQAHSLRKVIFGGE
ALDTVILKPWYARQVNAGTQLVNMYGITETTVHVTYYPLQPGDAQRLGASPIGRRIPDLQ
LYVLDARGEPVPMGVVGELYVGGAGVARGYLHREALTAERFLDNPFSHAPNARMYRTGDL
GRWLADGSLEYMGRNDEQVKIRGFRIELGEIAARLNDHPDVLDAVVVAREDVPGDKRLVG
YYTSAEDKAGLDIEQLRAWLSGLLPEYMVPAAYVRLASLPVTANGKLDRKSLPAPDRDSI
ASRAYEAPQGSIEIALASLWAELLHVEQVGRQDNFFELGGHSLLAVTLIARMRRLDMRAD
IRVLFVQPTLAALAEAVGGDTEINVPANLIDAHCQRITPELLPLVALDQPAIERIVARVP
GGAANVQDIYPLGPLQTGILYHHLTAGDRDPYLLQPQFAFADASRLEAFCHALQRVIERN
DILRTGLFWEGLQAPVQVVWRQAPLRVEETALQDLFNAPRMDLTQAPLLQLVYAHDPANQ
RIAAVLRYHHVIMDHIALDVLSHELQAILLDNEAQLAAPVPYRNYIAHVVQGPGEDAHEA
FFREQLGDIDEPTLPYGLAMASAEQIPGDARLTLDRDLCRQIRDQARQLSVSAATLMHLA
WAKVLGQLSGRDSVVFGTVLLGRLRGGEGGERALGVFINTLPLRMDLGGHCARSAVLDLH
GRLVGMLAHEHAQLALTQRCSALPAGAPLFNTLLNYRHSAVPEVDDQANNTAWQGIEVVH
AEERSNYPLTLSIDDFGDSFSLTAQAAPGIDPQRICAYVQQALVHLVQALEQQSATALIE
SSVLPEAERERLLVSFNDTRRDYPRGQPVHRLFERRAALHPHAVAAVHGRRSLTYGELNE
RANHLAHYLLVQGVRPNERVAILLPRSLELLISQLAIGKCAATYVPLDVNAPAERQHYML
DDCQAKCVLTQSATSLGSTVQRIDLDQLNLDDQPAHDPGLPQASDTAAYVMYTSGSTGAP
KGVRVAHRGIARLVLNNGYADFNEQDSIAFASNPAFDASTMEVWGALLNGGQLLVIEHTT
LIDPMRFSAALRHGNVSVLFLTSALFNQYVQLIPEALSGLRLLLSGGERADPASFRTLLA
QAPGLHLLNAYGPTETTTFATACEVRALADHAESVPIGRPIGNTTVYVLDAHQRLTPLGA
IGELYIGGDGVALGYLNRPDLTAEKFIADPFSDQPGAMLYRTGDLGRWLEDGQLECLGRN
DDQVKIRGFRIELGEIVNCLHQLPGIREAVVLAREDEPGQVRLVAYFTSRLDAEAPAPEQ
MRAHLQANLPEYMVPGAFVELTALPLTANGKLDSRALPKPDHSSLLGLAYEPPQGEIEIA
LAQIWAEVLQLERVGRHDHFFDLGGHSLLAMRMVSQVRQQMGMELPLGELFALGELAAVA
SALAGAGRSELSMILPAPRDQSLPLSFAQQRLWFLAQMEGGNQAYNIPLALSLQGSLDVA
ALTAALGRIVERHETLRSRFIAREEGAEVVFTAPTAMAFLHIEDLRQNPQTLAERVAAEA
TAAFDLTRGPLIRGCLLQVEDERHVLLLTVHHIVSDGWSMGVLTRELHALYPALRRGEAD
PLPALSIQYADYAVWQQGWMSGERLQHQAAYWRQALEGAPTLLTLPADRPRPAQQDFAGA
SLNVRLDGQLTAGLRALAQRQGVTLYMTLLTAWGALLARLSGQAEVVVGSPIAGRGRAEL
EGLIGLFVNTLAIRIDTASASTGDTLLAQVRARVLEAQDHQDLPFEQVVEIVRPTRSLAH
GPLFQTTLNWLAGETALPEMDGLSLATVEQQSQVSKFDLSLNLGEQGDALFGTLDYATAL
FDEATVQRYCGYFEQLLRTLVNNQQVVLAEIPLVGLQEREYLLDTLNASAVSLPQGQTIH
ALIEARAEGMPEAVAARVGEQSLSYAQMNRQANSLAHHLISLGVRPDDRVAVVARRGLDT
LVSLLAVLKSGACYVPVDPAHPDERINYLLADSAPVVVLAEQAFMARLPALKVPLLALDR
PQWPEKPANPLVSGQTPGDLAYVIYTSGSTGQPKGVMVEHRTLANLVHWHCQAFALHAGS
HTATVAGFGFDAMAWEVWPALCAGATLHIPPAEISNEQLDLLLDWWLAQPLQVAFLPTPV
AEYAFSRELYHPTLHTLLIGGDRLRQFHREPGFAVINNYGPTETTVVATSGRLLPDGSLD
IGKPIANTRVYLLDEQQQLVPTGVAGELYIGGEGVARGYLNQPQLTAERFLSDPFCDNPQ
ARMYRTGDLARWNADGTLDYLGRNDDQVKVRGMRIELGEIEAQLTSLPGIEESLVVARED
EPGQSRLVAYFIEQGPRSALDIARLRADLLDRLPGYMVPSAFVRLDAWPLTANGKVDRRA
LPVPDRDAMPGREYEPPQGELEMALADIWSDLLQVEQVGRTDHFFELGGHSLLAVTLIAR
MRRRGMDADIRVLFAQPTLAALARAVGSGAQVKIPANLIGTDCTSITPDLLPLVKLDQAG
IDRVVASVTGGASNIQDIYPLGPLQAGIFYHYLSAAEDDPYRLQARFAFADRSRLEAFSQ
ALQQVIARNDVLRTSLCWEGLETPVQVVWRHADLPVIEVPLAALDNPEPLELVRAPLLRL
IHADDPDNGRIVAVLLFHHLIMDHVALDLLSQELQAVLLDQAAQLPAPVPYRNYIAQTLL
GAGDDAHETFFREQLGDLDEPTLAYAQTWLPGPEVAGEARLRLDADLSRRLRHQVRQLGV
SPASLMHLAWAQVLGRLSGRDSVVFGTVLLGRLNGSEGADRTLGVFINTLPLRIDLADQS
ARDALSQTHRRLTGLLAHEQASLAIAQRCSALPAGAPLFSALLNYRHSAVPGEANEAAGK
AWQGIELLQSGERSSYPLTLSVDDLGEAFDLTALTSTGIDARRVCAYLACAVEGLVDALE
QAPSEPIQALNILPGTERTELLDGFNTDRLTAECPLPVHLRIEQQALDQPNALAAKAGDQ
HLSYAELNARANALAHHLIGLGVRPDDRVAVVARRGLETLTGLLAVLKAGACYVPVDPGH
PDERISYLLENSTPMVVLAQFDLLTRLPELQVPVIALDRPDWSQRTDNPSVPEMTTQHLA
YVIYTSGSTGLPKGVMVEHRTLNNLVDWHCEAFNLRAGSHTASVAGFGFDAMAWEVWPAL
CAGAVLHLPPAEIGNEQLDVLLDWWLAQPLQVAFLPTPVAEYAFSRELHHPTLQTLLIGG
DRLRHFNRDPGFAVVNNYGPTETTVVASSGRMQPGKVLHIGKPVTHARLYVLDSRGQPVP
LGVPGELYIGGAGVARGYLNRADLTAERFLDDPFSDRPGARMYRSGDLVRWLSDGTLEYL
GRNDDQVKIRGVRIEPGEIEQHLAQCPGVGEAVVTTQRLDDGTLRLVGYFTRRNASLDSA
ALRAHLLGQLPEYMVPAVFVGLDALPLTQNGKVDRKALPAPDLAALANLAYQAPSTALEE
RLADLWAEVLEVGKIGRHDSFFELGGHSLSAIRLVSLLQKAGVSLTLAELFQHPSVAALA
GLLDQRPGSPDAAREVITVRAGGSESPLFLLHDFTGLDAYFPVLGQHLQGDFPIYGLPGI
GLGQQQLRTMECLAARMVERIRQVQPRGPYRLAGWSFGGVLAYEVATQLLGMDEAVTFLG
LIDSYVPRLTDQGKARWQGPDLLERQLLSHCTAHWQAQAGEGAAKLARLNSFSEQAPLPD
FATLLQLCRDEGLLYEELALASDQQLHHYLDREVAHGQALAHYQLEPLSLPIHLFRAEQR
PMAPIASSSTLGWGEILSRNQLQCVDVPGDHMTMMQAPHVAVLGLSIVQALHSAPATPPP
TPAHQSLLAIQSGRDGHAPVFCVPGAGDSVTSFIGLAEALGPEWPIHGLQPRGLDGRSVP
HSRVEAAAQSHVQAIEALYPKGPLHLVGHSFGGWAAHAMAVKLQARGREVVSLTLIDSEA
PGGEGLDGKPYTATAVLERLVEALQLSSGRSLELDPLAFADSDTVTQMHLLQQAMVRVGL
LPPRLAAQALQGIVRTFASALRTVYRPEPGGYSGRASLVLVNDPQLDALDNQLEHAACAS
QWQHLLPQLSLWQGPGNHFSVLKAPDVYSLAAWWYDGLAVGVGETQ