Protein Info for Psyr_2221 in Pseudomonas syringae pv. syringae B728a

Annotation: sarcosine oxidase, gamma subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: K00305, sarcosine oxidase, subunit gamma [EC: 1.5.3.1] (inferred from 100% identity to psb:Psyr_2221)

Predicted SEED Role

"Sarcosine oxidase gamma subunit (EC 1.5.3.1)" in subsystem Choline and Betaine Uptake and Betaine Biosynthesis (EC 1.5.3.1)

MetaCyc Pathways

• glycine betaine degradation I (6/8 steps found)
• creatinine degradation I (1/4 steps found)
• creatinine degradation II (1/5 steps found)

KEGG Metabolic Maps

• Glycine, serine and threonine metabolism

Isozymes

Compare fitness of predicted isozymes for: 1.5.3.1

Use Curated BLAST to search for 1.5.3.1

Sequence Analysis Tools

See Q4ZUA8 at UniProt or InterPro

Protein Sequence (190 amino acids)

>Psyr_2221 sarcosine oxidase, gamma subunit (Pseudomonas syringae pv. syringae B728a)
MTSLIQNSPVGANPRALCTLQDLTDRPRVGFRGTQSADYLTARGFSLPEAPNRAVTQADG
SHVARLSQTEYLLLGSPLDDGQRIADEEARWELDHSANYLLPREDSHAWLQLSGECIAEV
MAKLCGVDLRPGAFAPGSVAQTSAARINVIVINLGAQAEPCFQILFDRASLAYFKDAMLD
AMTEFGGRYL