Protein Info for Psyr_2116 in Pseudomonas syringae pv. syringae B728a
Annotation: Deoxyguanosinetriphosphate triphosphohydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 87% identical to DGTL2_PSEA8: Deoxyguanosinetriphosphate triphosphohydrolase-like protein (PLES_20171) from Pseudomonas aeruginosa (strain LESB58)
KEGG orthology group: K01129, dGTPase [EC: 3.1.5.1] (inferred from 100% identity to psb:Psyr_2116)Predicted SEED Role
No annotation
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.1.5.1
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q4ZUL3 at UniProt or InterPro
Protein Sequence (443 amino acids)
>Psyr_2116 Deoxyguanosinetriphosphate triphosphohydrolase (Pseudomonas syringae pv. syringae B728a) MDWQTLLNRERLGKTLHSPEELGRSPFHKDHDRIIFSGAFRRLGRKTQVHPVSSNDHIHT RLTHSLEVSCVGRSLGMRVGETLRSALPDWCDPSDLGMVVQSACLAHDIGNPPFGHSGED AIRNWFNQAAGRGWLDAMSETERNDFLNFEGNAQGFRVLTQLEYHQFDGGTRLTYATLGT YLKYPWTARHADSLGYKKHKFGCYQSELPILEQIAGKLGLPQLEDQRWARHPLVYLMEAA DDICYALIDLEDGLEMDLLNYAEVESLLLGLVGDDLPETYRQLGPGDSRRRKLAILRGKA IEHLTNAAARAFVEQQDALLAGTLPGDLVEHMHGPAKRCVLNAKDMARKKIFQDKRKTLH EIGAYTTLEILLNAFCGAAVEQFGGRTPSFKHRRILDLLGNSAPDPKAPLHTSFLRMIDF IAGMTDSYASEMAREMTGRSGQI