Protein Info for Psyr_1567 in Pseudomonas syringae pv. syringae B728a

Annotation: Uncharacterized conserved protein UCP006173

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 149 PF03692: CxxCxxCC" amino acids 26 to 93 (68 residues), 44.6 bits, see alignment E=9.5e-16

Best Hits

Swiss-Prot: 100% identical to Y1567_PSEU2: UPF0260 protein Psyr_1567 (Psyr_1567) from Pseudomonas syringae pv. syringae (strain B728a)

KEGG orthology group: K09160, hypothetical protein (inferred from 100% identity to psb:Psyr_1567)

Predicted SEED Role

"YcgN (Fragment)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZW57 at UniProt or InterPro

Protein Sequence (149 amino acids)

>Psyr_1567 Uncharacterized conserved protein UCP006173 (Pseudomonas syringae pv. syringae B728a)
MAAKVEPFWMRKTLDQLDTQEWESLCDGCGLCCLQKLEDEEDNAVYYTRIACKLLDLKTC
QCSDYANRRASVPDCIQLTPGQADEFKWLPPTCGYRLVSEGKDLPLWHHLVCGDRTAVHH
ERISQSGRMLSENNVAEDDWEDYLIFRAG