Protein Info for Psyr_1562 in Pseudomonas syringae pv. syringae B728a

Annotation: phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 558 transmembrane" amino acids 23 to 43 (21 residues), see Phobius details amino acids 56 to 78 (23 residues), see Phobius details amino acids 85 to 106 (22 residues), see Phobius details amino acids 129 to 149 (21 residues), see Phobius details amino acids 161 to 182 (22 residues), see Phobius details PF08019: EptA_B_N" amino acids 65 to 215 (151 residues), 172.7 bits, see alignment E=5.3e-55 PF00884: Sulfatase" amino acids 245 to 533 (289 residues), 257.9 bits, see alignment E=1.4e-80

Best Hits

KEGG orthology group: K03760, phosphoethanolamine transferase (inferred from 100% identity to psb:Psyr_1562)

Predicted SEED Role

"membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZW62 at UniProt or InterPro

Protein Sequence (558 amino acids)

>Psyr_1562 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase (Pseudomonas syringae pv. syringae B728a)
MPDAYSFDKQTTMPTPRTVRPEVVTLLASAFLLLGFNINLWQHLFSITSADSKGLAMRFA
FGLMIFCVFNIVLTLLAFRRVFKPVLISLFMISAGVVYFMTEYGVMIDAGMFRNFAETNV
TEVQGLLSLKLALYILLLGVVPSLILWKLPISYRRWHLELFSKLLVTVACCVAIGGVALA
NYQGLSSLFRNHHELRLMVVPSNYIGASLGYLSEQVLSARRPFVKIGEDAKRSADWATHA
RKSLTVLVVGESARAENFGILGYGRNTTPNLNKESGLVAFTDVYSCGTETAVSVPCMFSN
MGRKNYNATQARNQEGLLDVLKRAGIDVIWRDNQAGCKGTCDRVTFQDVSNLKDPLLCNN
HECRDEILLQNLQTFIDSLDKDTVLVLHQMGSHGPEYYKRYPKEFEKFTPVCESNALNNC
SRDSIVNAYDNTLLYTDHVLSTLIDLLRANQNKVDTAMVYLSDHGESLGEYNLFLHGTPY
VLAPDQQKHVPMMVWLSDTYQKSFAVTPECLAKQRNAPLSQDNLFHSMLGLLKVDTKVYD
PSLDMFAGCRSELAATDK