Protein Info for Psyr_0929 in Pseudomonas syringae pv. syringae B728a

Annotation: Glycosyl transferase, family 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 796 PF13641: Glyco_tranf_2_3" amino acids 509 to 728 (220 residues), 64.7 bits, see alignment E=1.2e-21 PF00535: Glycos_transf_2" amino acids 512 to 688 (177 residues), 57.5 bits, see alignment E=1.7e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_0929)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZXY5 at UniProt or InterPro

Protein Sequence (796 amino acids)

>Psyr_0929 Glycosyl transferase, family 2 (Pseudomonas syringae pv. syringae B728a)
MISEQPLVNSDPTAQPPGNTRLNGAITGLYGDVLQGWALDTLHVDERLVVEIYVDGACVS
LVRADQFHPRAGADDPFHGFGVQLRQGWLDNAKHISARVANSDCWLAGDLQLPTTPSAEP
APIASQVWHSGGLRLGGWSWDPDAPQRHVHITVRESSRVLGQATCNVHHQALVYRATSDH
GFSFDLPWELADGKPHTLDIENDLGHTLSGSPITLCCWHDGLEGLLKQHERAPTEQNLAL
LTRIAADQAMRLPKSAGFHHYPEWFERFRPAAPKDNQLQQCRIGVLLISDGDSALEATSL
ASLNAQRTAPHQLAKADTTDLLPALKQLLEAGCDAVVPLMAGDHLGMHALEHLRPLLDDG
CAWGYADCDRDGQQGKRSLPWLKPVWDIDLFIGADIFTPGAIFGAAIIDKALALIPATDG
QRTLDWHQLSAAIALATETSQAVVAHLPHVLYHRSHLAAASPEQAEPSAQRLQAIAWLSE
SLARGASVTQLPKFPALLRTQWPLPATLPRVSLIVPTRDQLALLRACIEGLLTATDYPDL
EIIVVDNQSSDPQTLIYLQELSGRGVKVLPYPHPFNYSAINNYAVTHATGELIGLVNNDI
EIIAADWLKEMVSQLLRPNVGAVGAKLLWPNRMVQHGGVVVGVNGLAAHTGNNLEQRDPG
YLGMNQTTRRQSAVTAACLLLRKSVFDTLQGLDEQAFPVAFNDVDLCLRIRQQGLNIIWT
PFAELIHAESASRGKDQTPEKRARGQREQQGFIERWSQAGQSDPYYHPALSLDYLSGPYG
GLAMPPRHRRLRRVGT