Protein Info for Psyr_0812 in Pseudomonas syringae pv. syringae B728a

Annotation: stress protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 191 PF02342: TerD" amino acids 1 to 187 (187 residues), 294.5 bits, see alignment E=1.3e-92

Best Hits

Swiss-Prot: 72% identical to TERD_ALCSP: Tellurium resistance protein TerD (terD) from Alcaligenes sp.

KEGG orthology group: K05795, tellurium resistance protein TerD (inferred from 100% identity to psb:Psyr_0812)

Predicted SEED Role

"Tellurium resistance protein TerD"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZYA2 at UniProt or InterPro

Protein Sequence (191 amino acids)

>Psyr_0812 stress protein (Pseudomonas syringae pv. syringae B728a)
MALTLQKGGNLSLSKTDPTLTNVLIGLGWDPRATDGQDFDLDASAFLLDANGKVRSEADF
IFYNQLKSADGSVEHTGDNRTGEGDGDDEVVKVDLTRVPADVDKIAFVVTIHDAESRGQN
FGQVSRSFIRVVNEKSGAEVVRYDLAEDASTETAMIFAELYRNNGEWKFRAVGSGFKGGL
KALANSFGMNF