Protein Info for Psyr_0427 in Pseudomonas syringae pv. syringae B728a

Annotation: conserved hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 244 PF13489: Methyltransf_23" amino acids 34 to 190 (157 residues), 57 bits, see alignment E=7e-19 PF01209: Ubie_methyltran" amino acids 51 to 156 (106 residues), 43.4 bits, see alignment E=9.7e-15 PF13847: Methyltransf_31" amino acids 52 to 176 (125 residues), 76.4 bits, see alignment E=7.5e-25 PF05175: MTS" amino acids 52 to 153 (102 residues), 23.3 bits, see alignment E=1.5e-08 PF08241: Methyltransf_11" amino acids 53 to 150 (98 residues), 93.3 bits, see alignment E=4.2e-30 PF08242: Methyltransf_12" amino acids 53 to 148 (96 residues), 58.9 bits, see alignment E=2.4e-19 PF13649: Methyltransf_25" amino acids 53 to 146 (94 residues), 82 bits, see alignment E=1.5e-26

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_0427)

Predicted SEED Role

"FIG025233: SAM-dependent methyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZZC5 at UniProt or InterPro

Protein Sequence (244 amino acids)

>Psyr_0427 conserved hypothetical protein (Pseudomonas syringae pv. syringae B728a)
MNRPFLSDSYVEETRFGLWFLRSNIWQYRVLRVAIDDLRSLFASAPPVAPVLLDAGCGQG
RSFQHLNKVFQPSRLIGVDADPHSLDMSREEARARGVEVELIGSDCAALPVPDASVDLLF
CHQTFHHLVDQERALAEFYRVLKPGGYLLFAESTEAYIDTWVIRWLFRHPMHVQKSAAQY
LQMIRDQGFEFDAQNVSYPYLWWSRARDFGLLEVLKLQKPRPFGQREETLVNVVARKPLE
VGAS