Protein Info for Pf6N2E2_884 in Pseudomonas fluorescens FW300-N2E2
Annotation: Inosose isomerase (EC 5.3.99.-)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 45% identical to YFIH_BACSU: Uncharacterized protein YfiH (yfiH) from Bacillus subtilis (strain 168)
KEGG orthology group: None (inferred from 79% identity to ara:Arad_0117)Predicted SEED Role
"Inosose isomerase (EC 5.3.99.-)" in subsystem Inositol catabolism (EC 5.3.99.-)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 5.3.99.-
Use Curated BLAST to search for 5.3.99.-
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A159ZS75 at UniProt or InterPro
Protein Sequence (319 amino acids)
>Pf6N2E2_884 Inosose isomerase (EC 5.3.99.-) (Pseudomonas fluorescens FW300-N2E2) MKLGFVTDSLGNLPLREMLKQAERLGVSGLEINTGGWSTAPHFDLTQMLASADHRQALKR SFQEHGLEIISLNANGNPLHPTQPAQGQCLRDTIRVAGELGVKTVCTMSGLPEGRAGDRM PNWVVASWPPETQAMLRYQWEERLLPFWNEIAELARENGVERIALELHGNQCVYNVRSLL KLRNAIGPVIGANLDPSHLFWMGADPLVAAEALGDAIYHVHAKDTLLNAPVQAVDSLLEN GSLMDISSRSWSYITLGFGHGEQWWRQFCYRLKMAGYDGWLSIEHEDVLLNSLEGLEKSV RLLQSVMPVATSDFKPQPI