Protein Info for Pf6N2E2_607 in Pseudomonas fluorescens FW300-N2E2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1570 transmembrane" amino acids 727 to 746 (20 residues), see Phobius details amino acids 780 to 798 (19 residues), see Phobius details PF20178: DUF6543" amino acids 386 to 642 (257 residues), 66.3 bits, see alignment E=1.8e-22

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZRZ3 at UniProt or InterPro

Protein Sequence (1570 amino acids)

>Pf6N2E2_607 hypothetical protein (Pseudomonas fluorescens FW300-N2E2)
MTSSSPADSPSALAQSVGLQFSSRPTFEQFAQRMLEQAIQEKYPTLVFDLSKTRLATPDP
ASRGYLLDPFMPRVLDYLALGTPVEFKDRNGRRSFLSDSPPRLLAPDDGKLEMKVIEKLL
LELPWTVPIGLEDALTRYWNANIDTGPQDDKQDGTSRWQWLSEVLRNLAQIRSLQQQDLT
GQAREALGQIVQWPDREQRFRRHGQSAVYAYSLETRLTRDGSSSLLTSSDILLIQCKNNA
TLLLLCSPAGAVQVFDSLEAFTQHWGALIASQYIVDSVTCQRNEISGNAFETQAALILEQ
QLADLQAVQLPARIGLPDLQALYNELSDPARYLLDAPRPMPVTSARIAPLIPDWLRQASV
LDRTKIQQYSLALASAKKRNQGRTFLSDIQDIKAFAADALLKCMGQANDSSPVKAQANQY
QPDDVELTFSAAAGYPGTIGIVEKRTMSLTELAINNLVARPGVDPVLTHRRGLALPVWLT
ADFITRKGGLIEQVDIGTTYPRYLQQNLLDGGPRTQERQRMFADEMPAQLPLDALKQLLN
QENGMTRQGLALIEALLKPDADEQRVAGRPVVIRHLAFLRKPEAHPDTVTNMFIIEPEDV
ATGPHVLYRPLYTPSLQQYPTRQALLQAIVAPGDLQQSVLAWMSDAARPIYANGGFQEPH
IVRFYQGDEFSLPDKPAPATLAVDSVNDELRQFLRNGELMQYLYGSNARALVTQADRDSV
SNSESRWAVLLHGGSLLFNTLLLPLLRGPAMATAWLWNLMASASQDIPSLSSEDAVTREL
AAVDLLLNLGMLLLQFPSISAPPHAPLPESLKEQAMRPPAPRTIPEQWPAPAPPSIHEGS
VALPGERFGDSGASLDLSFASARRRLTAEQLARLQRFEVSRPASLPEPTKYGPYTGLYVI
RNTWHALVDGKMYQVTPESDGSAIIVNPLAPRDPAQNGPVLQADARGNWSIDLRLRLRGG
MPPKRLAKLRDIKTQRAAELSELLKNYYKGEADEQRALDTAQEVMTRTQAGNFTEAQRAD
KRARFYKLLEKQTDTYLKLLDNVTEYASHDMQLPPGIIRALMENVVNNARKGFLINEFEL
TALDAAYGQFTQDYSTLQANVAGNVLDYFNYLDALSDINDRSIYWLELRDRYLEALLNLG
AAGAQVFERLTRDRPLGERTPLATKALQLPTLASLIFKDPDSNLPENLHSVTKLLMEQAR
SQSDLSTYELTPSEQIEVLESLVEHYGAALDAMQGMKALNAADMDTSYFGRLFRLVEGLY
EEASTKLAAEIKPEPQPRKRPPKRSRTVAGRPQKKVIKTRKSGVLIGDLKPAGTSLPIEV
VELRSEVDDRLLATYSQHDDVWDLVEVQRPAPAPRTRSVKAIKADARKLLGQLDNSLANA
ERYKTQCRFPQEIEEILSNEASRYRKLSEELERAFTASKNPRTAADQTLTEQLSNAVSRL
TTRGSELRTELSLKLPPTDSNLRYLFEKNLVQVARLGERIALKGERKDFLQEYAINDRDG
WPLWYAHFHYETADTPKADFSVAHLKTKEQRKEHYHSMLAKAKSPYAVVNVHRGQIGRPL
AQSKFLPLAP