Protein Info for Pf6N2E2_6056 in Pseudomonas fluorescens FW300-N2E2

Annotation: Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 447 PF04715: Anth_synt_I_N" amino acids 13 to 137 (125 residues), 76.3 bits, see alignment E=3e-25 TIGR00553: aminodeoxychorismate synthase, component I" amino acids 93 to 440 (348 residues), 365.8 bits, see alignment E=9.8e-114 PF00425: Chorismate_bind" amino acids 182 to 436 (255 residues), 305.9 bits, see alignment E=2.5e-95

Best Hits

KEGG orthology group: K01665, para-aminobenzoate synthetase component I [EC: 2.6.1.85] (inferred from 98% identity to pba:PSEBR_a3963)

Predicted SEED Role

"Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)" in subsystem Chorismate: Intermediate for synthesis of PAPA antibiotics, PABA, anthranilate, 3-hydroxyanthranilate and more. or Folate Biosynthesis (EC 2.6.1.85)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.85

Use Curated BLAST to search for 2.6.1.85

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161H5C5 at UniProt or InterPro

Protein Sequence (447 amino acids)

>Pf6N2E2_6056 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) (Pseudomonas fluorescens FW300-N2E2)
MPTCSVYPLPYHANPAEYFAAIRHAPGSVLLDSGRPSAERGRYDLLSAWPLEQLAVLPDE
SGSDFLQRLRIQLTQLGDAELPTTVQLPFAGGVIGYLSYDFGRHLETLPSHAKDDLQLPD
ARFGVYDWALVSDHQAGTSQLVFHPHCGEDERQRLIALFSQPTAASVGVFSLEGPMTPDL
SAEAYRQAFERIQAYIQAGDCYQVNFAQRFRAPCQGDAWAAYQALRAACPTPFSGFQSLP
DGGAVLSLSPERFVKVSEGQVETRPIKGTRPRGTTPSEDAAHAAELLASPKDRAENLMIV
DLLRNDLGRTCRIGSVRVPELFSLESYPNVHHLVSSVTGELAVDKDALDLIAGSFPGGSI
TGAPKIRAMQIIDELEPTRRGLYCGSLLYLDVRGEMDSSIAIRSLLVKDGQVCCWGGGGI
VADSDWQAEYQESITKVKVLLETLQNL