Protein Info for Pf6N2E2_5769 in Pseudomonas fluorescens FW300-N2E2

Annotation: Catalase (EC 1.11.1.6)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 378 transmembrane" amino acids 12 to 37 (26 residues), see Phobius details PF00199: Catalase" amino acids 79 to 188 (110 residues), 30.1 bits, see alignment E=1.4e-11

Best Hits

KEGG orthology group: None (inferred from 99% identity to pba:PSEBR_a4217)

Predicted SEED Role

"Catalase (EC 1.11.1.6)" in subsystem Oxidative stress or Photorespiration (oxidative C2 cycle) (EC 1.11.1.6)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.11.1.6

Use Curated BLAST to search for 1.11.1.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A621 at UniProt or InterPro

Protein Sequence (378 amino acids)

>Pf6N2E2_5769 Catalase (EC 1.11.1.6) (Pseudomonas fluorescens FW300-N2E2)
MLITLWLRLGAFLGKTLLWLLGIGLLGWALSTAWFAWQHKGPVPDKEQVAPGEAAMTQDI
IQTAIRIVDQHRESTRYLRDAHAKAHGCVMAEVQVPSDLPAPLRQGVFAEPGKVWQATIR
LSNGNAYPQFDSLRDARGMAIKLTNVPGKQLLADRQSQGEQDFVMFNHPNFFVSDVAEYR
QNVAAQADGKKAMAFFPSLDPRSWQIRHLFIALATLSPPPASPTQTTYFSVSPYKFGEAN
AKFRVAPDPDSCPSYTLPAQNQDLPNFLRSALNQQLSTDRVPACFVLQIQRQDPSKYMPI
EDTSIEWQESDAPFETVARIKVPAQDFDTPKLNLACDNQSFNPWFGIEAHRPIGGINRLR
KAVYEAVSDYRHSRNAEQ