Protein Info for Pf6N2E2_5538 in Pseudomonas fluorescens FW300-N2E2

Annotation: 4-hydroxybenzoyl-CoA thioesterase family active site

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 155 TIGR02799: tol-pal system-associated acyl-CoA thioesterase" amino acids 10 to 135 (126 residues), 157.8 bits, see alignment E=1.6e-50 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family" amino acids 13 to 130 (118 residues), 112.5 bits, see alignment E=1.4e-36 PF13279: 4HBT_2" amino acids 19 to 137 (119 residues), 59.3 bits, see alignment E=5.3e-20 PF03061: 4HBT" amino acids 24 to 107 (84 residues), 56.6 bits, see alignment E=2.7e-19

Best Hits

KEGG orthology group: K01075, 4-hydroxybenzoyl-CoA thioesterase [EC: 3.1.2.23] (inferred from 99% identity to pba:PSEBR_a4439)

Predicted SEED Role

"4-hydroxybenzoyl-CoA thioesterase family active site" in subsystem Ton and Tol transport systems

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.2.23

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A225 at UniProt or InterPro

Protein Sequence (155 amino acids)

>Pf6N2E2_5538 4-hydroxybenzoyl-CoA thioesterase family active site (Pseudomonas fluorescens FW300-N2E2)
MRAQNGLESFAHRCRVYYEDTDAGGIVYYVNYLKFMERARTERLRELGFAQSALAGEDLL
FVVHSSEARYHAPARLDDELLVSADVIELNRVSLRFKQQVRRATDNVLLCEGQFLVACVR
THSLKPRAIPEALRAAFAGVSGAGTHSEQEIKRGS