Protein Info for Pf6N2E2_5359 in Pseudomonas fluorescens FW300-N2E2

Annotation: Cell division protein FtsQ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 264 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details amino acids 35 to 35 (1 residues), see Phobius details amino acids 37 to 38 (2 residues), see Phobius details transmembrane" amino acids 23 to 34 (12 residues), see Phobius details amino acids 36 to 36 (1 residues), see Phobius details PF08478: POTRA_1" amino acids 49 to 117 (69 residues), 66.7 bits, see alignment E=1.8e-22 PF03799: FtsQ_DivIB_C" amino acids 121 to 239 (119 residues), 74.9 bits, see alignment E=9.8e-25

Best Hits

Swiss-Prot: 73% identical to FTSQ_PSEAE: Cell division protein FtsQ (ftsQ) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K03589, cell division protein FtsQ (inferred from 100% identity to pba:PSEBR_a4618)

Predicted SEED Role

"Cell division protein FtsQ" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161H4R7 at UniProt or InterPro

Protein Sequence (264 amino acids)

>Pf6N2E2_5359 Cell division protein FtsQ (Pseudomonas fluorescens FW300-N2E2)
MVAKEPMSARLPKANFGFLKSLFWPVLLVALGFGTYEGAQRLLPYADRPIARINVQGDLS
YISQQAVQQRIAPFVASSFFTIDLAGMRKELEQMPWIAHAEVRRVWPDQVSIRLEEQLPV
ARWGDESLLNNQGQAFTPRELANYEHLPQLFGPQRAQQQVMQQYQVLSQMLRPLGFSIAR
LELRERGSWFLTTGAGSSGPGIELLLGRGNLVEKMRRFIAIYDKTLKEQITNIARIDLRY
ANGLAVGWREPVAPTTAEPAVAKN