Protein Info for Pf6N2E2_5162 in Pseudomonas fluorescens FW300-N2E2

Annotation: Sugar/maltose fermentation stimulation protein homolog

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 248 TIGR00230: sugar fermentation stimulation protein" amino acids 1 to 233 (233 residues), 212 bits, see alignment E=3.9e-67 PF17746: SfsA_N" amino acids 13 to 80 (68 residues), 74.6 bits, see alignment E=5.6e-25 PF03749: SfsA" amino acids 84 to 224 (141 residues), 154.7 bits, see alignment E=1.3e-49

Best Hits

Swiss-Prot: 84% identical to SFSA_PSEF5: Sugar fermentation stimulation protein homolog (sfsA) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)

KEGG orthology group: K06206, sugar fermentation stimulation protein A (inferred from 98% identity to pba:PSEBR_a4807)

Predicted SEED Role

"Sugar/maltose fermentation stimulation protein homolog" in subsystem Fermentations: Mixed acid

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A490 at UniProt or InterPro

Protein Sequence (248 amino acids)

>Pf6N2E2_5162 Sugar/maltose fermentation stimulation protein homolog (Pseudomonas fluorescens FW300-N2E2)
MQFSPALEEGRLIRRYKRFLADIETVHGELLTIHCPNTGSMLNCMAEGARVWFSRSSDPK
RKLPGTWEIGETPQGRLACINTARANALIEEALRAGVISELNGFTGLKREVAYGVENSRI
DFRLDYDHGSAWVEVKSVTLGFDGTNVAAFPDAVTLRGAKHLRELACLARDGVRAVQLYC
VNLSGIEAVRPAQEIDPVYAAALRDAVAAGVEVLAYGVTLTPEQMWVDRGLPVLLELDPD
ALLVLPAV