Protein Info for Pf6N2E2_506 in Pseudomonas fluorescens FW300-N2E2

Annotation: Hydrogen cyanide synthase HcnA / Opine oxidase subunit C

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 107 PF13510: Fer2_4" amino acids 21 to 97 (77 residues), 70.6 bits, see alignment E=4.7e-24

Best Hits

Swiss-Prot: 76% identical to HCNA_PSEPH: Hydrogen cyanide synthase subunit HcnA (hcnA) from Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CHA0)

KEGG orthology group: None (inferred from 95% identity to pba:PSEBR_a3361)

MetaCyc: 76% identical to hydrogen cyanide synthase HcnA subunit (Pseudomonas protegens CHA0)
Glycine dehydrogenase (cyanide-forming). [EC: 1.4.99.5]

Predicted SEED Role

No annotation

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.4.99.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165ZUM9 at UniProt or InterPro

Protein Sequence (107 amino acids)

>Pf6N2E2_506 Hydrogen cyanide synthase HcnA / Opine oxidase subunit C (Pseudomonas fluorescens FW300-N2E2)
MQPQDLLRRKFDIQPLTQADMTVRLDGQAVSAAHGETVLTVIQSLGQRQVARNDHDQISG
AYCGMGVCQCCLVKIDGRHKRRACQTLVRPGMQIETRVNRITETEAP