Protein Info for Pf6N2E2_5032 in Pseudomonas fluorescens FW300-N2E2

Annotation: Putative large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3213 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF05860: TPS" amino acids 31 to 290 (260 residues), 201 bits, see alignment E=3.3e-63 TIGR01901: filamentous hemagglutinin family N-terminal domain" amino acids 65 to 163 (99 residues), 65.3 bits, see alignment (E = 3.7e-22) TIGR01731: adhesin HecA family 20-residue repeat (two copies)" amino acids 380 to 419 (40 residues), 11.1 bits, see alignment (E = 3.4e-05) amino acids 468 to 503 (36 residues), 16 bits, see alignment (E = 9.5e-07) amino acids 490 to 525 (36 residues), 16.4 bits, see alignment (E = 7.1e-07) amino acids 509 to 543 (35 residues), 13.6 bits, see alignment (E = 5.5e-06) amino acids 526 to 563 (38 residues), 20.9 bits, see alignment (E = 2.7e-08) amino acids 573 to 605 (33 residues), 15.6 bits, see alignment (E = 1.3e-06) amino acids 612 to 645 (34 residues), 15.5 bits, see alignment (E = 1.4e-06) amino acids 628 to 664 (37 residues), 15.6 bits, see alignment (E = 1.3e-06) amino acids 695 to 729 (35 residues), 8.4 bits, see alignment (E = 0.00023) amino acids 716 to 749 (34 residues), 12.1 bits, see alignment (E = 1.5e-05) amino acids 734 to 768 (35 residues), 11.2 bits, see alignment (E = 3e-05) amino acids 789 to 816 (28 residues), 9.1 bits, see alignment (E = 0.00014) amino acids 798 to 836 (39 residues), 11.3 bits, see alignment (E = 2.8e-05) amino acids 865 to 899 (35 residues), 14.6 bits, see alignment (E = 2.5e-06) amino acids 882 to 920 (39 residues), 18.6 bits, see alignment (E = 1.5e-07) amino acids 904 to 929 (26 residues), 7.5 bits, see alignment (E = 0.00043) amino acids 931 to 963 (33 residues), 11.1 bits, see alignment (E = 3.2e-05) amino acids 976 to 1009 (34 residues), 7.5 bits, see alignment (E = 0.00045) amino acids 1011 to 1048 (38 residues), 6.1 bits, see alignment (E = 0.0012) amino acids 1176 to 1211 (36 residues), 20 bits, see alignment (E = 5.3e-08) amino acids 1216 to 1255 (40 residues), 15.5 bits, see alignment (E = 1.4e-06) PF13332: Fil_haemagg_2" amino acids 1914 to 1976 (63 residues), 32.8 bits, see alignment (E = 7.3e-12) amino acids 1979 to 2074 (96 residues), 32.4 bits, see alignment (E = 9.9e-12) amino acids 2069 to 2156 (88 residues), 23.4 bits, see alignment (E = 5.7e-09) amino acids 2162 to 2314 (153 residues), 70.6 bits, see alignment 1.8e-23 amino acids 2253 to 2369 (117 residues), 37.2 bits, see alignment (E = 3.3e-13) amino acids 2383 to 2503 (121 residues), 25.2 bits, see alignment (E = 1.6e-09) amino acids 2470 to 2632 (163 residues), 101.5 bits, see alignment 5.6e-33 amino acids 2631 to 2699 (69 residues), 16.8 bits, see alignment (E = 6.2e-07)

Best Hits

Predicted SEED Role

"Putative large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161GT50 at UniProt or InterPro

Protein Sequence (3213 amino acids)

>Pf6N2E2_5032 Putative large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family (Pseudomonas fluorescens FW300-N2E2)
MDVRSPLSQSIALSLASIVFLNPIVAAAAGLAVDAAAGGKTTIGAAGNGVPVININGANG
SGLSHNKFTDYNVGKNGVILNNATGKTQSTQLGGIIVGNSNLKGQAAQVILNEITSGNRS
HLAGYTEVAGQAARVIVANPNGITCSGCGFINTPRATLTTGKPIMDGQRLDSFQVDGGDI
SIEGAGLDASDVDQFDLITRSAKLNANIYAKNLNVVTGRNDVSADNLSATARAEDGSEKP
ELAIDSSALGGMYAGAIRLVGTEKGVGVRLAGDMAASVGDIQIDASGKVSMNNASANQAI
TVNGQSLDVQGKVYAGTQVSVNTRANVTVGKSIAARDKVTVTSAGKVINNGIVEAGVNPD
NTRNQGGDVTITAKQLTNTGNVVASRNLAVDASEVIDNQNGIIQGANVGLTSARLVNQGT
SARVLGLNTLSLLTPAIVNLGALIRFGDGQSTTLNLDSLDNTDGHLELAGGNLELNTRQL
TNLRGSVIADQLQLTAERLDNQGGLIASSVGQSNLKVSGQLDNTGGVLQAQSLLDVSAAR
VLNQGGKVVADHLKLTAERLDNSTNGLISAELGNNALTVTQDLINQGGRIQAASVLTVKS
GTVDNLGGTLVGQQLTLVSQGALNNQQGKISADQLDLTAQDVNNTEGLLQGTSVATLSAR
DLNNLKGNVNGGQLSVGLDSLSQNTQGVLSAETGKLTMVVAQQLNNSAGHLQAKVGDLDV
SAAALNNQQGVIVGKQLLLTQSGLLDNRGGRVVGDQLTVGAGRIDNSANGLLLAGTGGAL
LTLKDQGMTRGQLLNNQGRVQSDGHLQINGNNLDNHGGVLLGSSIGANASSLDNSAQGSV
IATGGTIELVVSGVLNNALGLIDGGESAVRVTQATQFDNQGGTLAGKRLDVQGTVVDNRK
GQLLSGTEGLKITATTVDNSEGLVLARGGHADLQLNQGTLNNQGGALQGDSAEVVAASVD
NSALAGKAGLINAQVGDLKLLVDNLTNQAGRLYAQGLLSSQGQVLDNRAGGEISARTLSL
NAVSTYNQTGLIESGGNLLLTGDNLNNSTGRIRAIGGNLSQILLTGDLNNQSGSIGVTSQ
ALNLKAGALNNLAGSVEHTGAGLLKIDLASLSGNQGSITGLGHGDVDIGSINGTGRLQFN
GALDVAVGNNLNLLAGDRIASASNLMLSATTLNNSGEVLSDGDLSLTLTGDLNNDGLLSA
AKAVSLSAGNLTQNGGRIASAGDTTLNLRGNLDNLGRLIASQNLKIHAAQVSNRGTLGAL
GQVDIFSGNGISTSANTLIYSGADMNLRGATLSNLYGDIYSKGNLSFAALDGGQANSLSN
RSANIESEGDMNLNVANLENTKDTFEIGESLVSRRIDINCTDCSGKHHTATFIVNSTYLG
KIIQDSPGARLIAGRDLLINAGTVENKQSLLAANRDAFVNATNFYNRGATLDQRVESTTY
FLHGVKQGDFRWAESNANAWNAANAGSAPDQQQPIPTAITQYPLIGQSSVVHNGTQTGYA
STLQSGRQLNLTVTGNLENGTLTQQASAQLTGQSLTNTVGLVGGQTITVNALGSGGSTQV
AADVRRVERVTADGSTQLSFVPVDFAGVPFAAVDPTALATYRLPEGDYGLFVRSQNPDSR
YLIETNPNLTNLSRFMSSDYMLGLLGYNDDRSWRRLGDGLYETRLIREAVLAQTGQRFLA
ASLTSDYEQYQYLMDNAIAAKNSLQLSVGVALSAQQVAALTHDIVWMETRQVQGQQVLVP
VLYLAQAESRNLRGGSLVQARDINLMAGNDLTNVGTLRASSNLVAEAGNNLYQGGLTQAS
ERVSLMAQNSIRNALGGEVRGNQVDLTAVKGDVVNERAVMEVLYGSGSRTNLDQGSLISA
RQQLNVSAGRDLTNKGQINSDGNATLNAGRDVEMLAVQDHTFTQNAIRRGLVTNNTVKTL
GSSVTTGGNLEVNAGRDMAVVASQVKAGHDLALNAGNDIAIVSAQDEQSSTFYQKKKGSW
GKSKTTQSADSATSNVASQIEAGHDLTVNVTQDKDGRIGLTGGRDVSVIGSQLKAGNDLL
VGGAGDVNLMSAQEQTDSSYSMKKKGSFGLSKSGNSRSSSSITQVGSELSAGNDAVVVAG
GNVNLSASRVDAKRDAQLRAGMVDKNGDVNLMDAANESTSQSEKYKSKVGFSTSGNFISI
ASAKKSGQANLQTQSVGSQVTAGRDVTVQSIRDVNMIGSTAQAGRNLQVGAGRDVNVLAG
SNSQDQSNWKSTKQSGLSLESDRNGFTAFAGREATKEKSRAAQQTAAGSQLVAGQDMTVQ
AGRDLTLEGAGLDAGRDISLQATRDINVDAADETFIQERSKTRDRNGLTANISHNYGNTM
DAINGTGKGEDNVSKASSVLSTVDAINSFTSGPTSATHLGSASQGTSSRSEIRDNVPSTL
SAGRDINAVAGNNLNVRGSQFEAGRDITLVGKNVNLDVARGAINQESQTTRSQGGINGQS
GGGSARAGIGGSNGVASEEMTQGTNNPSVLLSGRDTNIEASENLTMIGTQVIAGHDIDLR
AGKDLTIRAAQNDSDSESTRRSGGGEVGIALGGKDFIAVYASVDMGKGKLERETEKQQTA
YLYAGNQLRFNSGNDTTIAGANLRADEVVGRVGGDLLVSSVPDTGKVSGKQFDASVTVSI
GLAGGGGVSGSVGAGKTTGKTNWVEQQTSITGKNGVDIRTEKHTQIDGALIAADNGKLKL
DTNTLGFRDINGVDKEHSYYVNVGGAFGWGADAGNGAKATGGKDVAFTGDKSLSGAPKEG
FNGWSVSGYDYRKEREQDVRATVGAGNIIVRNDAVTGQNSTSGLNRDLTKAYDITKDKEK
RTELYVSESSLNSVGNPSQTLDRWKKGLQDYGKNSSDLFKNYGNLTKATEQALAENPSLA
PLAWIPGVMQSAMDKTSYGTLGLMPGVISHGGVATQLPVLLSGDMSFYRTELVYQKDAKG
NVAMDPKTGKPLLDLAKTKFDMILRPDAPGAIATNGIQNAFEAALVNGGMQTGRDNYMQA
YNPEHGFLGDLLESAWDVNLGGIKRSGNAQQLHEFYQAGIDQGFKLDLVGHSQGALLTYR
ALEGLDFGQNAGSIQLSGAPVYAQKFFTAAEKAGFNTTDNAVFQVNRPDKQVFFGMLPMT
DSVSDLLGRNAMNSSDPISRFLGAVFTLPGLMGKDSPHSNYLCQVQSMCGNGASQLQQDF
RNGTTTNPDGTRSKTYIVPTFIDKNGNAFGASL