Protein Info for Pf6N2E2_4746 in Pseudomonas fluorescens FW300-N2E2

Annotation: Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 808 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF07660: STN" amino acids 63 to 111 (49 residues), 33.2 bits, see alignment 5.6e-12 PF07715: Plug" amino acids 156 to 254 (99 residues), 78.5 bits, see alignment E=8.2e-26 TIGR01783: TonB-dependent siderophore receptor" amino acids 157 to 807 (651 residues), 424.5 bits, see alignment E=4.3e-131 PF00593: TonB_dep_Rec_b-barrel" amino acids 327 to 778 (452 residues), 222.1 bits, see alignment E=4e-69

Best Hits

KEGG orthology group: K02014, iron complex outermembrane recepter protein (inferred from 94% identity to pba:PSEBR_a5195)

Predicted SEED Role

"Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A231 at UniProt or InterPro

Protein Sequence (808 amino acids)

>Pf6N2E2_4746 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent (Pseudomonas fluorescens FW300-N2E2)
MSRPLDTLLRPSLLAIAIAFATPFASGPLLAAEQASSVRTYNLPAAPLASTLNQIASQAG
LALSLNPSLASGKTSAPVQGQFDATDALREALRGTGLQLEQSSAGTYSLVAAPEGVMALP
ETSVIGAGLSETAWGPTEGYVATRTAAGTKTDTPIVELPRSVSVVTRQQMEDRSVLNLND
ALRYTAGVQSSGYGSDSRNDWLLVRGFIPTQFLDGLPLPKGNYITPKIEPWNLERIAVLR
GPASSVYGQTPPGGMLDMVSRRPQAESSHEVELQAGSYEHKQINFDSTGKVDDEGQFLYR
LSGTVRDSNSQVDHIPDKRYNLAPSLTWNINDDTRLTFLSQYTRDDTGITGQFLPLQGTK
LSSPAGKISHHKNLGDPDWEFYDRTYYALGYNFEHRLNDTWQFRQNLRYTKSDLESQGIT
AGTFPPDQAVSPDGTVKRSAGIVDEDISQFAVDNNFQADFQTASLSHTLLLGLDHQRSNS
NSRWLWGSTGVPDSNIHNPIYGQDFSNVQYFTMYDYNQKTQQTGLYVQDQIALDNWRLTL
GGREDWIHTGTEFHNQAGATNTQRDKKFSGNAALSYVFDNGVTPYISFAQSFQAAAGSTV
NSTDAFKPTEGEQYEVGIKYQPPGTKTLLTAAVFDLTQQNNSVTENNITRQVGEVRVRGL
ELEASGDVTDSLKLIGSYTYNDSEITKGTVAEEGKRMTQVPRHQATAWADYTWHNGPLDG
FGVGAGVRYVGDTYGNTTNTDWGHVGSYTVYDASAHYDLGRLNNSLKGVSVAVDAKNVFN
KDYLSTCDGSYCYYGDQRNVVASVNYKW