Protein Info for Pf6N2E2_430 in Pseudomonas fluorescens FW300-N2E2

Annotation: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 359 TIGR02142: molybdate ABC transporter, ATP-binding protein" amino acids 2 to 357 (356 residues), 460.6 bits, see alignment E=1.9e-142 PF00005: ABC_tran" amino acids 17 to 161 (145 residues), 111.9 bits, see alignment E=5.7e-36 PF03459: TOBE" amino acids 295 to 358 (64 residues), 55.1 bits, see alignment E=1.1e-18

Best Hits

Swiss-Prot: 79% identical to MODC_PSEF5: Molybdenum import ATP-binding protein ModC (modC) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)

KEGG orthology group: K02017, molybdate transport system ATP-binding protein [EC: 3.6.3.29] (inferred from 98% identity to pba:PSEBR_a3430)

Predicted SEED Role

"Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)" in subsystem Molybdenum cofactor biosynthesis or Transport of Molybdenum (TC 3.A.1.8.1)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.3.29

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZVA5 at UniProt or InterPro

Protein Sequence (359 amino acids)

>Pf6N2E2_430 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) (Pseudomonas fluorescens FW300-N2E2)
MIQARFQLDHGAFSLDLDVQLPGRGVTALYGPSGSGKTTCLRCIAGLERPARGFIEVNGQ
VWQDSEHAVFMPPHKRPVGYVFQEASLFAHLSVRANLAFGLKRIAPAQRRVDMQQATELL
GIGHLLDRQPHNLSGGERQRVGIARALLTSPQLLLMDEPLAALDTRRKNEILPYLQRLHD
ELDIPVLYVSHSQDEVARLADHIVLLDGGRALASGPIGETLARLDLPLALGDDAGVVIEG
KVSGYDLAYQLLTLNLPDSQLNVRVAHTSLALGQPLRFKVQARDVSLSLANDAQTSILNR
LPVTVVSEQAADNAAHVLVRLEAAGTPLLARITRYSRDQLKLHPGQLLWAQIKAVAVLA