Protein Info for Pf6N2E2_4248 in Pseudomonas fluorescens FW300-N2E2

Annotation: SAM-dependent methyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 274 PF02353: CMAS" amino acids 42 to 210 (169 residues), 37.9 bits, see alignment E=5.3e-13 PF01209: Ubie_methyltran" amino acids 53 to 167 (115 residues), 25.3 bits, see alignment E=3.6e-09 PF13847: Methyltransf_31" amino acids 54 to 167 (114 residues), 43.1 bits, see alignment E=1.6e-14 PF13489: Methyltransf_23" amino acids 54 to 202 (149 residues), 61.9 bits, see alignment E=2.4e-20 PF13649: Methyltransf_25" amino acids 59 to 150 (92 residues), 53.5 bits, see alignment E=1.3e-17 PF08242: Methyltransf_12" amino acids 59 to 151 (93 residues), 43 bits, see alignment E=2.5e-14 PF08241: Methyltransf_11" amino acids 59 to 153 (95 residues), 64.3 bits, see alignment E=5.3e-21

Best Hits

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a5623)

Predicted SEED Role

"SAM-dependent methyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A3D2 at UniProt or InterPro

Protein Sequence (274 amino acids)

>Pf6N2E2_4248 SAM-dependent methyltransferases (Pseudomonas fluorescens FW300-N2E2)
MLSLLKKLTMGTPAPAEPIADKVDPYMLGLHDAVLSGWFNQQTDELFTGFPVSPGDTLLD
VGCGDGGNVHFCAMRGAKIIIADIDAAKVEATRQRLSDTPAREVECHVTDCNPLPIADAT
ATRVVSTEVIEHVDDPAQFLAELVRVGQPGALYLLSVPHPSSEDLQKDIAAPEYFRKPNH
IRIISEEQFKAMVSEAGLTVLSHSQYGFYWSIWMLLFWEAKVDLSNADHPLLNHWADTWQ
AVLNSPRGAQIKQALDAVVAKSQVIIARKPGGLS