Protein Info for Pf6N2E2_4246 in Pseudomonas fluorescens FW300-N2E2

Annotation: SAM-dependent methyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 257 PF13489: Methyltransf_23" amino acids 20 to 169 (150 residues), 54.4 bits, see alignment E=2.6e-18 PF13847: Methyltransf_31" amino acids 21 to 126 (106 residues), 28.4 bits, see alignment E=2.5e-10 PF13649: Methyltransf_25" amino acids 26 to 117 (92 residues), 39.6 bits, see alignment E=1.4e-13 PF08241: Methyltransf_11" amino acids 26 to 120 (95 residues), 47.5 bits, see alignment E=4.8e-16

Best Hits

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a5625)

Predicted SEED Role

"SAM-dependent methyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A107 at UniProt or InterPro

Protein Sequence (257 amino acids)

>Pf6N2E2_4246 SAM-dependent methyltransferases (Pseudomonas fluorescens FW300-N2E2)
MLNGWFRSETGELLKGFAITADDTLLDVGCGEGVATLFAMRQGASVIFTDSEQDKVRELA
RQVEAQAGAPFLGLVSNSLPLPLADGCANKIVCMEVLEHIHEPEPFMAELVRMGRPGAQY
LLSVPASVGEHLQQGIAPPGYFQAPNHVQIFSAERFAALVEEAGLVIEHRQASGFFWVMG
MIFFWASEQAAGRELEGAVRDRIQAPYPVLMERWASLWQDLLTQPDGLAIKQVLDRFMPK
SQVIIARKPGPFSESTS