Protein Info for Pf6N2E2_3981 in Pseudomonas fluorescens FW300-N2E2
Annotation: T1SS secreted agglutinin RTX
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"T1SS secreted agglutinin RTX"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A160A2X3 at UniProt or InterPro
Protein Sequence (4986 amino acids)
>Pf6N2E2_3981 T1SS secreted agglutinin RTX (Pseudomonas fluorescens FW300-N2E2) MSSVIAVVKSIVGQVFVVSPEGIRRVLIEGDRLNVGDQLDTGPAGAVTLELADGRTLDLG RDTQWSANAPDSSTDLEQATAQAAPSVEELQQAIAAGVDPTTALEATAAGATAAGTGGAA GGGHSFVVLDATAGSVDPTVGFPTEGLAAAAATDNNILGGDTTDTTANAVLNATMTLSAT PTLTEAGGVLVYTATVTQAPQTALTVTLSNGAVIVIPAGQLTGSVNVPLAPNDTVYNDPS QISVTVTGTTGGTGIAVTVPTTPAVTQITDTIDTTTVTLTAGNTVTEGGQITYTATLTNP AQTPVTVTLSNGSVITIAAGQTTGTVNVETPANDVYNNGSTISTTITGATGGNFENLVPS TTPAVTTITDSADTTGLTLTASNTITEGGQITYTATLTNPAQTPVTVTLSNGSVITIAAG QTTGTVNVETPANDVYNNGSTVSTTITGATGGNFENLVPSATLAVTTITDSADTTGLTLT ASNTITEGGQITYTATLTNPAQTPVTVTLSNGSVITIAAGQTTGTVNVETLANDVYNNGS TVSTTITGATGGNFENLVPSTTPAVTTITDSADTTGLTLTASNTITEGGQITYTATLTNP AQTPVTVTLSNGSVITIAAGQTTGTVNVETLANDVYNNGSTVSTTITGATGGNFENLVPS TSPAVTTITDSVDTTTVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGK TITIAAGASSGVLDVAVGNDVYQGPTTVTESIVSASGGNLEAIAPNTAPVSTIVSDVNDT TTVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAAGASSGVLD VAVGNDVYQGPTTVTESIASASGGNLEAIAPNTAPVSTIVSDVNDTTTVTLTATPTVNEN GTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAVGASSGVLDVAVGNDVYQGPTTV TESIASASGGNLEAIAPNTAPVSTIVSDVNDTTTVTLTATPTVNENGTITYTATLTDANG NPVTAQNGPVTVTLDSGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASASGGNLEA IAPNTAPVSTVVSDVNDTTSVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTL DSGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASASGGNLEAIAPNTAPVSTVVSD VNDTTSVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAAGASS GVLDVAVGNDVYQGPTTVTESIASASGGNLEAIAPNTAPVSTIVSDVNDTTTVTLTATPT VNENGTITYTATLTDANGNPVTAQNGPVTVTLESGKTITIAAGASSGVLDVAVGNDVYQG PTTVTESIKDASGGNLEAIAPNTTPVSTVISDVNDTTSVTLTATPTVNENGTITYTATLT DANGNPVTAQNGPVTVTLDSGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASASGG NLEAIAPNTAPVSTIVSDVNDTTTVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPV TVTLDSGKTITIAVGASSGVLDVAVGNDVYQGPTTVTESIASASGGNLEAIAPNTAPVST VVSDVNDTTSVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAA GASSGVLDVAVGNDVYQGPTTVTESIASASGGNLEAIAPNTAPVSTVVSDVNDITTVTLT ATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAAGASSGVLDVAVGND VYQGPTTVTESIASASGGNLEAIAPNTAPVSTIVSDVNDTTTVTLTATPTVNENGTITYT ATLTDANGNPITAQNGPVTVTLESGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIST ATGGNLEAIAPNTAPVSTIVSDVNDTTTVTLTATPTVNENGTITYTATLTDANGNPITAQ NGPVTVTLESGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESISTATGGNLEAIAPNTA PVSTIVSDVNDTTTVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLESGKTI TIAAGASSGVLDVAVGNDVYQGPTTVTESIKDASGGNLEAIAPNTTPVSTVISDVNDTTS VTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAAGASSGVLDVA VGNDVYQGPTTVTESIASASGGNLEAIAPNTAPVSTIVSDVNDTTTVTLTATPTVNENGT ITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAVGASSGVLDVAVGNDVYQGPTTVTE SIASASGGNLEAIAPNTAPVSTVVSDVNDTTSVTLTATPTVNENGTITYTATLTDANGNP VTAQNGPVTVTLDSGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASASGGNLEAIA PNTAPVSTVVSDVNDITTVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDS GKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASASGGNLEAIAPNTAPVSTIVSDVN DTTTVTLTATPTVNENGTITYTATLTDANGNPITAQNGPVTVTLESGKTITIAAGASSGV LDVAVGNDVYQGPTTVTESISTATGGNLEAIAPNTAPVSTIVSDVNDTTTVTLTATPTVN ENGTITYTATLTDANGNPITAQNGPVTVTLESGKTITIAAGASSGVLDVAVGNDVYQGPT TVTESISTATGGNLEAIAPNTAPVSTIVSDVNDTTTVTLTATPTVNENGTITYTATLTDA NGNPVTAQNGPVTVTLDSGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASASGGNL EAIAPNTAPVSTIVSDVNDTTSVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTV TLDSGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASASGGNLEAIAPNTSPVSTVV SDVNDTTTVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAAGA SSGVLDVAVGNDVYQGPTTVTESISTATGGNLEAIAPNTTPVSTVVSDVNDTTTVTLTAT PTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAAGASSGVLDVAVGNDVY QGPTTVTESIASASGGNLEAIAPNTTPVSTIVSDVNDTTTVTLTATPTVNENGTITYTAT LTDANGNPVTAQNGPVTVTLESGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASAS GGNLEAIAPNTAPVSTVVSDVNDTTTVTLTATPTVNENGTITYTATLTDANGNPVTAQNG PVTVTLDSGKTITIAAGASSGVLDVAVGNDVYQGPTTVTESIASASGGNLEAIAPNTAPV STIVSDVNDTTTVTLTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITI AAGASSGVLDVAVGNDVYQGPTTVTESISTATGGNLEAIAPNTAPVSTIVSDVNDTTTVT LTATPTVNENGTITYTATLTDANGNPVTAQNGPVTVTLDSGKTITIAAGASSGVLDVAVG NDVYQGPTTVTESIKDASGGNLEAIAPNTTPVSTTVSDVNDTTTVTLTATPTVNENGTIT YTATLTDANGNPVTAQNGPVTVTLDSGKTITIAAGASSGVLDVAVGNDVYTGAPSVTESI KSASGGNLEAIGVDKTGASTAVGDTVDNTTVSITGSTSVAEGQAATYTVSLTNPAQTEVT LKIVYSGTAADGTDFTGVYTVKIPANATSATFNVATLDDKITEGTENFVVKIDSATGGNF EHLAVSGTNGSVSTSIIDNDAPPALDLDANNSSGKTGADYQVTFTEGTTGPGVSIADTDL SITDPDSTLLTGATIVLTNRQPGDALNLGNSVNGISINANSTDGKVVLTLTGNATLADYM QQIKNISFINNSEDPSTVPRIITVTVTDGASYSNTATTTVNVVGVNDAPVATGGAVTGTE DTSLVLGWSTFGISDVDNSATSLGVKITELPADGKLQYLDGATWKDVANNQTFTKADIDA GKLRFTPDANESGANGYVGSSTGNNQADYAQVKFQPTDGQALGNTGTVKIDITPVADAPT LNVAGNNVTSTGLIKEVWTGLSGLGTDGSGAPSGTLKSVIDAAGTPNSSGTVTNVQSDSN VNPGTASKTSGLIFLEAGKTYTFSGTGDDSLLVTIGGKTVAATTWGAGGQLNGSFTPTTS GYYTLDIYHHNQTGPGSYDVNLSVNGSTPVDLNGAGVPLYTGVTDLTNAGVTVSDLHGTN GEGYYDGFKLNEGAEGTSVHLSKITTALTDTDGSESLSVKIGGMPEGSVLSDGAGHFATV GSNGEASVSGWNLGSLTLTPPAYYNGQFNLTVTSTSTEALGGSATSTAQIPVTVHPATYN AVTATSGSDNVTGTDGNDIVVADIGGLTVVPGVNYNIAFMVDSSGSMSDSSIAAAKASLT SVFNTLKQSLGSNSGTVNIFLADFDSQVNSTVSVNLNDSDALTQLKDLLDSMVSGGGTNY EDVFKTTANFFKSTEALNNTGAKNLTYFITDGKPTYYQTGEQVNPTLYDSVKLDDVLSAA NYSVGKYYTQTIDSTHKYTIYEDGKMYLSTKNGKKWTDSYVGVVHAEGNGTFELSNQGGT GYGEYWNYVDSAAGSTDSFTLLKNLSTVEAIGLNSDVTLNDLKPYDSDSSPQTNIDPNNL ANSIIGHTEATLPGSDTVNGGDGNDILFGDLVSFNGVTGEGYQAIQAFVAQQSGVDVSKV TTSNVHQYITEHYTAFDVSGAHDGNDTLLGGAGNDIIFGQGGNDTLNGGKGNDILLGGTG NDTLIGGQGNDTLIGGLGGDTFVWKSGDTGTDVIKNFNAGEGDRIDLRDLLQGETGSTID HFLKISTVDGVSSLQVSTSGQFNTTNGGAATPDVTIKLEGNNWSNVNLNSLIAGSDPTIK VDHNNS