Protein Info for Pf6N2E2_3733 in Pseudomonas fluorescens FW300-N2E2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1354 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF20178: DUF6543" amino acids 422 to 638 (217 residues), 45.6 bits, see alignment E=3.6e-16

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZZY3 at UniProt or InterPro

Protein Sequence (1354 amino acids)

>Pf6N2E2_3733 hypothetical protein (Pseudomonas fluorescens FW300-N2E2)
MLENTPLQTASALLIHQLNASQQQMIRLNDAVPRASEVAARHLDDGFRQAFPTLVNKLAV
KEIRVCRLQDEAVPPTERAANEPAFKKVAQTVPLDTLFWRAVAGKINAHEFFDDLGNIDI
VTELNSVTEMPAALNSRDAKQAIKQLISVTPTSYEQMLARALDNFWDTPPDVSQDRSVSQ
WLADEFGRQLKAQADLHQLDGTLSPPLHKALTEHALSAPDATSRARLAERDRPGVYSLSI
TPEGWGFSVPVSGAVALTRHDNTDYPASAVLYSLGKPLEVYADLTALKASLEADDNVQYD
VTIAPIAGDFLAYLVMDLRAAQKTAVSDVLLNGPGDDEEISAWIARLDIAANLKDQLDLA
GAMDERALRLYQKKLDDWLHANPNVIGSDRVAWWNALQDLQITLADTPPPPDPVMLASPD
ALQDRTRTLLAGFIKDKYAPVDPDQVSLCIRKQTIDSHAPTGESPFGSGVSLGSAKAIFD
DCRSMTQWAMSNLTPDERNASHHTEEGPLSFAQIVEIIERANVGARIPPALLLAARERQA
QWMALKAKQMRAQAWAAHISGDFTHDKDNTGLNLVLAALDSAMPEARRKVNGHEVVVRQI
QWGDSVLKELLAFGVRKLSSRPSLTLYTPGAPDGKVFRDIHAGSERELEAVLVKTLISTL
EMTRWLISQLPLMEQADQLASLVPAAENLTLNEKIKKVTQSTFSWIKHRVQDDFALKVAS
PVVKGDLLKALHETQISHALKTADALMVTNAERDSAAAQEGRRNGVTLLAGAMAMFYAGR
LGGVLGRAILPTMAGGAAVSAIKDEGGSFSQWASDFISGLGEVVAEAGQDLIMARAARRR
DKTRPELSSLPRMPDPELGPFLLKGFDSKGLVPEGRNLYRDASGQAYLKMGHDYCKTAIQ
ESLRIIYAPNNRTHQRTVTWKNGRWHIEEPQRLLGGGVLHSLFSRAPETAQQKTYNALVE
GILVDHHWPSRQVVNTVKKVIHSMPEELAERTLRESMNDIDAPDIDTYLSRINQINKGLH
GLGQHKKPHESLLYKFNVWQAVDYCTRDIDSQVKGIQLTAAQKIKVFDMTLPLKKELFDN
EGNFKMMMSSLPDNLTGALFITIVPEQGKKKAAMTKIQDDIHEVVKVAEKRVWEDLGVRF
SGEGPEVEAAREDYKTNPANFAEYKKKKLGAFRDEMKKRHKPGLLTEIRNNKIPYVIANK
GKSQRKTLLVTGEDITNFAKNLSNYDAFDIEVVTQVPTKKVTGTSPTTSTSPVLGEASTA
IDKFTVTLSTLAETQMSYDNFPEAARAKINEIMDDIRAGRATTKRINKYYWYDMAQLSPG
GGRSAWRAAFERKGDTWILQGFYDYHANKPATVW