Protein Info for Pf6N2E2_3566 in Pseudomonas fluorescens FW300-N2E2

Annotation: exported protein, conserved

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 691 transmembrane" amino acids 7 to 29 (23 residues), see Phobius details amino acids 639 to 662 (24 residues), see Phobius details PF05170: AsmA" amino acids 1 to 575 (575 residues), 532.1 bits, see alignment E=2.3e-163

Best Hits

Swiss-Prot: 53% identical to YHJG_ECOLI: AsmA family protein YhjG (yhjG) from Escherichia coli (strain K12)

KEGG orthology group: K07290, hypothetical protein (inferred from 98% identity to pba:PSEBR_a583)

Predicted SEED Role

"exported protein, conserved"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165ZH05 at UniProt or InterPro

Protein Sequence (691 amino acids)

>Pf6N2E2_3566 exported protein, conserved (Pseudomonas fluorescens FW300-N2E2)
MTRTSKILAWSFASLVVLLAVLVLVIAFFDWNRIKPPLNAKVSEELHRPFAINGNLAVAW
QREPEEGGWRAWLPWPHVVAEDLSLGNPDWSKTPQMVTLKRVELRVSPLALLARRVAIPR
IDLTEPNANLQRLADGRANWTFQFDPKDPDAEPSSWVVDIGAIGFDKGHVTLDDQTLKTR
LYLLIDPLGKPIPFSDIVGDKAAKKAQDQGATPQDYAFAFKVNGQYHGQNLAGSGKVGGL
LALQDASRPFPLQAQAKIAETRVELAGTLTDPMNLGALDLRLKLAGNSLAHLYPLTGVTL
PDSPPYATDGRLIAKLHEPGGALFRYEAFNGKIGDSDIHGDLAYVASQPRPKLSGALVSN
QLLFSDLAPLIGADSNTEQKARGGASKQPADKILPVEEFRTERWSVMDADVEFTGKRIVH
SEQLPFNDLYTHLVLNDGQLSLEPLRFGVAGGRLDAQIRLNGHAQPLEGRAKLTARGFKL
KQLFPGFEPMKTSFGELNGDADITGRGNSVAALLGTSNGTLKMLINDGAISRELMELAGL
NVGNYVVGKIFGDKEVKINCAAADFDIKTGLATTRLFVFDTENAIIYIDGTANMANEQLD
LTITPESKGWRLISLRSPLYVRGPFAKPAAGVKAVPLMLRGAGMVALGVIAAPAAGLLAL
VAPSGGEPNQCAPLLEQMKAGKAPVTVKPTR