Protein Info for Pf6N2E2_3397 in Pseudomonas fluorescens FW300-N2E2

Annotation: Phage protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 527 PF13289: SIR2_2" amino acids 137 to 265 (129 residues), 83.6 bits, see alignment E=7.2e-28

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165ZFF0 at UniProt or InterPro

Protein Sequence (527 amino acids)

>Pf6N2E2_3397 Phage protein (Pseudomonas fluorescens FW300-N2E2)
MASHITLSLTRLLAQNGGAPFLFVGSGFSRRYIGLEQWDELLKRFCDGIQEFGYYSSQNN
QDLAKAASAIAKDFNEIWWKSEKYSESRKNNSDSITSVSSALKHEMASYLANISHNKISA
DGLSDELEALSRLNVDGIITTNWDLFIEELFPDYKVFIGQEELLFSNPQSIGEVYKIHGC
ASQPNSLVLTNEDYEIFEEKNPYLAAKLITIFIEHPVIFIGYSISDRNIQKIIESIVNCL
GQDKLDLFGRNLIFLQRTKQDEEPSFQSALMSIGETRLNITVIRTSNYLDVYEAIESTKR
KIPARILRYCKEQMYDLVKSNDPETKLAVLDIDQIDNKDDVEFVVGVGVAKSHEGISKQG
YKGITIDDIFSDIISVKSQYDPAELLREVYPPLLKRPNKYIPGFRYLHALGITSHDELMK
SEFSEVEGIIFKANRKDYRINQYGKHYESNYKNLSTREIIAETTAEKATLIIPFQDDGDI
DIAAVKELLENNKNNLKTEHSSYSTYFRKLACLVDRLEFGFSKPTQS