Protein Info for Pf6N2E2_3357 in Pseudomonas fluorescens FW300-N2E2
Annotation: Phosphoglucosamine mutase (EC 5.4.2.10)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 92% identical to GLMM_PSEPF: Phosphoglucosamine mutase (glmM) from Pseudomonas fluorescens (strain Pf0-1)
KEGG orthology group: K03431, phosphoglucosamine mutase [EC: 5.4.2.10] (inferred from 100% identity to pba:PSEBR_a775)MetaCyc: 62% identical to phosphoglucosamine mutase (Escherichia coli K-12 substr. MG1655)
Phosphoglucosamine mutase. [EC: 5.4.2.10]
Predicted SEED Role
"Phosphoglucosamine mutase (EC 5.4.2.10)" in subsystem Sialic Acid Metabolism or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 5.4.2.10)
MetaCyc Pathways
- O-antigen building blocks biosynthesis (E. coli) (10/11 steps found)
- UDP-N-acetyl-D-glucosamine biosynthesis I (5/5 steps found)
- dTDP-β-L-rhamnose biosynthesis (5/5 steps found)
- colanic acid building blocks biosynthesis (9/11 steps found)
- glycogen degradation II (5/6 steps found)
- UDP-α-D-glucose biosynthesis (2/2 steps found)
- sucrose biosynthesis I (from photosynthesis) (7/9 steps found)
- glucose and glucose-1-phosphate degradation (4/5 steps found)
- sucrose degradation II (sucrose synthase) (4/5 steps found)
- superpathway of anaerobic sucrose degradation (14/19 steps found)
- glycogen degradation I (6/8 steps found)
- sucrose biosynthesis II (6/8 steps found)
- glycogen biosynthesis I (from ADP-D-Glucose) (3/4 steps found)
- starch degradation V (3/4 steps found)
- sucrose degradation IV (sucrose phosphorylase) (3/4 steps found)
- peptidoglycan recycling I (10/14 steps found)
- GDP-α-D-glucose biosynthesis (2/3 steps found)
- trehalose degradation V (2/3 steps found)
- superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis (4/6 steps found)
- chitin biosynthesis (6/9 steps found)
- CDP-6-deoxy-D-gulose biosynthesis (3/5 steps found)
- D-galactose degradation I (Leloir pathway) (3/5 steps found)
- starch degradation III (2/4 steps found)
- glucosylglycerol biosynthesis (2/5 steps found)
- starch biosynthesis (5/10 steps found)
- glycogen biosynthesis III (from α-maltose 1-phosphate) (3/8 steps found)
- CMP-legionaminate biosynthesis I (2/10 steps found)
- superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis (10/24 steps found)
- superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis (5/19 steps found)
- streptomycin biosynthesis (3/18 steps found)
- superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis (12/33 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 5.4.2.10
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A165ZF71 at UniProt or InterPro
Protein Sequence (445 amino acids)
>Pf6N2E2_3357 Phosphoglucosamine mutase (EC 5.4.2.10) (Pseudomonas fluorescens FW300-N2E2) MSKKYFGTDGIRGRVGEYPITPDFMLKLGWAAGMAFRKMGACKVLVGKDTRISGYMFESA LEAGLTSAGADVMLLGPMPTPAIAYLTRTFQAQAGIVISASHNPHDDNGIKFFSGQGTKL PDDIELMIEELLDTPMTVVESSKIGKVSRINDASGRYIEFCKGSVPTGTSFSGLKIVVDC AHGATYKVAPSVFRELGAEVVVLSAQPNGLNINHNCGSTHTEALQAAVLAEQADLGIAFD GDGDRVLMVDHTGTVVDGDELLFIIARDLHGRGKLQGGVVGTLMSNLGLELALADLDIPF VRANVGDRYVISELLERNWVIGGENSGHIVCFDHTTTGDAIIAALQVLMALKARNEGLAQ SRQALRKCPQVLINVRFGGGVNPLEHAKVKQASEHVTQAMAGRGRVLLRKSGTEPLVRVM VEGEDEAQVRGYAEELAKLVTEVSA