Protein Info for Pf6N2E2_3239 in Pseudomonas fluorescens FW300-N2E2
Annotation: FIG00963364: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a873)Predicted SEED Role
"FIG00963364: hypothetical protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A160A173 at UniProt or InterPro
Protein Sequence (634 amino acids)
>Pf6N2E2_3239 FIG00963364: hypothetical protein (Pseudomonas fluorescens FW300-N2E2) MLPSTSDITALPAVLVGPLLRRLEPTRLVMWLVGTRALAMTLRVAGVGDLALDATRCTVV PVGQRAFVHLIDVRLANPLPRDVTIDYDLLVDGAPIAEWAPHLLYDGAQCPNFILHSRIE QLVHGSCRKPHYPANDGLLCVDRLLAQAPEQRPALLMMSGDQVYADDVAGPMLRAIHALI ECLGLFEECLEGAVVEDSARLYQHPASYYHRADLLPALESNETLRERFFGGARKPIFTSS SADNHLVTFAEVMAMYLLVWSPVPWTLITVQPPELTVERRQRYDLEQQRIDAFKTGLGGV ARVFAHLSCLMIFDDHDITDDWNLSAQWEETAYGHPFSKRIIGNALIAYMLCQGWGNNPD AFADVLPQTLALSDTARDRYLDSEPQDQLIDTLLGFQQWHYVLPSTPALVVLDTRTRRWR SENNLKQPSGLLDWEALSELQQELLDHPSAIIVSPAPIFGVKLIETVQRVFSWCGYPLLV DAENWMAHRGAAQVILNIFRHSRTPGNYVVLSGDVHYCFVYEVLIPHRKGGPRIWQITSS GIKNEFPPALLEWFDRLNRWLYSPRSPLNWFTKRRSMRIVPHTPEHAEAGERLWNSAGIG QVFFNEQGQPAQIYQHNANGQPPTRMLPPKSPPT