Protein Info for Pf6N2E2_3229 in Pseudomonas fluorescens FW300-N2E2

Annotation: Putative glutathione transporter, ATP-binding component

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 255 PF00005: ABC_tran" amino acids 23 to 169 (147 residues), 119.3 bits, see alignment E=2.1e-38 PF13304: AAA_21" amino acids 135 to 204 (70 residues), 33 bits, see alignment E=6.5e-12

Best Hits

Swiss-Prot: 42% identical to AMIF_STRPN: Oligopeptide transport ATP-binding protein AmiF (amiF) from Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)

KEGG orthology group: K02032, peptide/nickel transport system ATP-binding protein (inferred from 99% identity to pba:PSEBR_a885)

Predicted SEED Role

"Putative glutathione transporter, ATP-binding component" in subsystem Utilization of glutathione as a sulphur source

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZZ21 at UniProt or InterPro

Protein Sequence (255 amino acids)

>Pf6N2E2_3229 Putative glutathione transporter, ATP-binding component (Pseudomonas fluorescens FW300-N2E2)
MSMIEIAGLNLSFGTGAALNAVLHDVDLSVAEGEAFGLVGESGSGKTTVLRCLAGQYQHW
SGQLRVAGQAVTRNLPLNHYRTVQMVFQDPYASLHPRYTIDAALQEPLRIHGIDGRAQKV
SEILRKVGLNDSFRFRYPHQLSGGQRQRVAIARALILRPRVLLLDEPTSALDVSVQAEIL
NLLADLRRQEGLTYLMVTHDLAVVAHLCDRLAVMQQGRVVETLDSHLLASDGATHAYTRL
LVQASRDIQRVPIAV