Protein Info for Pf6N2E2_3211 in Pseudomonas fluorescens FW300-N2E2

Annotation: Outer membrane receptor proteins, mostly Fe transport

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 783 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF07715: Plug" amino acids 48 to 155 (108 residues), 69.1 bits, see alignment E=4.5e-23 PF00593: TonB_dep_Rec" amino acids 260 to 747 (488 residues), 154.6 bits, see alignment E=7.9e-49

Best Hits

KEGG orthology group: None (inferred from 93% identity to pba:PSEBR_a901)

Predicted SEED Role

"Outer membrane receptor proteins, mostly Fe transport" in subsystem Hemin transport system

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A020 at UniProt or InterPro

Protein Sequence (783 amino acids)

>Pf6N2E2_3211 Outer membrane receptor proteins, mostly Fe transport (Pseudomonas fluorescens FW300-N2E2)
MPGLGHRLLLLGSLSMVPWASVQAEQAAPSALTLDATTVTARRREEDPQDVPIPINVLYG
EQLDEAGLHSLRDIQQRVPGLVVSGHDARYAGFGLRGFGATAYNDGLEGSVGTYVDGVYQ
ARQGMAFTELMDIERIEVLRGPQGTLFGKNTTAGALNIITRQPTFEPEANLETSYGERGL
REYRGTVSGPLQDDVLAGRLNVFDSATDGAVENLQDGARLGDADSHGLRGQLLWTPTPDF
SARLIADYAEQNEAGNVLLVNHYSQQTRKRAQFLGYPLSEPDPYKREARIDAPGHPQTLQ
NGVSLELNWDLDEAMRLTSITAYRDWDYRATRDSDSTALSVAESETELGHRQFSQEWRLS
GTVGSSVDYVAGLYYLRQQLDREIDAEFGQDAASWFVGDQLEALRKLYGITFTDPKQVPA
MLLDGARQRYDGEQKGDSRAIFGQVSWRPIEPLELTGGLRYSQERKDGWISRDVSNLAPL
TGLPAVFQAGGLLLRDIALGGGYYREDSIKENNVSSLLSASYRFSDGVMGYVSWSRGYKA
GGINFDVVGPFTAPTFEPERATSLELGMKTRFWDERALLDLAVYQTDVDNYQALTYSPPT
TMFAPPLRDNLINVGKVRLRGIELDSAWQLTPRLTGRLGLAWSDARYRSFPNAPCPPASG
QWTCDLSGDRLYNAPEWNLSSGLDHTHPLPYGLEAFSGIDYSFRTGYSGTLEGGEGSYQP
SYGLTNLRLGLRSQDRAWEVEGWVRNVFDRNYITAVYSLLGAGDYGVMTGSERTLGTTVR
LRY