Protein Info for Pf6N2E2_32 in Pseudomonas fluorescens FW300-N2E2

Annotation: Membrane protein mosC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 383 transmembrane" amino acids 22 to 40 (19 residues), see Phobius details amino acids 52 to 74 (23 residues), see Phobius details amino acids 82 to 100 (19 residues), see Phobius details amino acids 105 to 130 (26 residues), see Phobius details amino acids 143 to 164 (22 residues), see Phobius details amino acids 170 to 190 (21 residues), see Phobius details amino acids 202 to 222 (21 residues), see Phobius details amino acids 242 to 263 (22 residues), see Phobius details amino acids 275 to 294 (20 residues), see Phobius details amino acids 300 to 320 (21 residues), see Phobius details amino acids 331 to 354 (24 residues), see Phobius details amino acids 360 to 381 (22 residues), see Phobius details PF07690: MFS_1" amino acids 22 to 217 (196 residues), 45 bits, see alignment E=3.5e-16

Best Hits

Swiss-Prot: 54% identical to Y1221_YERPE: Uncharacterized MFS-type transporter YPO1221/y2967/YP_0917 (YPO1221) from Yersinia pestis

KEGG orthology group: None (inferred from 99% identity to pba:PSEBR_a3899)

Predicted SEED Role

"Membrane protein mosC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165YH81 at UniProt or InterPro

Protein Sequence (383 amino acids)

>Pf6N2E2_32 Membrane protein mosC (Pseudomonas fluorescens FW300-N2E2)
MTAITPPPTFIPGRLEQMSTRIAYLIAGIGIAAWAPLVPYAKVRANLDEGTLGLLLLCLG
VGSILAMPISGALATRFGCRRVLSGGTILICLALPLLATMTSLPWLVAALFLFGAGLGTV
DSTVNLQAVIVERASGKTMMSGFHGMFSLGGIIGAAGVSALLGLGLSPLGATLVVNGVLL
VALFKAAPHLLPYGSESSGPAFAIPHGVVLFIGILCFIVFLAEGAVLDWSAVFLTTERAV
DTAYAGLGYAAFALTMTVGRLTGDSVVHRLGAKRVIIYGGSIAAAGFLLATLAPMWQAAL
LGYGLVGAGCSNIVPVLYTAVGKQTLMPEAIAVPAITTIGYAGILAGPALIGFVAHGSSL
SFAFGLIALSLVAVAISGKVLKV