Protein Info for Pf6N2E2_2910 in Pseudomonas fluorescens FW300-N2E2

Annotation: Carbamate kinase (EC 2.7.2.2)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 309 signal peptide" amino acids 1 to 14 (14 residues), see Phobius details TIGR00746: carbamate kinase" amino acids 1 to 300 (300 residues), 427.8 bits, see alignment E=1.1e-132 PF00696: AA_kinase" amino acids 1 to 281 (281 residues), 82.1 bits, see alignment E=2.8e-27

Best Hits

Swiss-Prot: 83% identical to ARCC_PSEAE: Carbamate kinase (arcC) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K00926, carbamate kinase [EC: 2.7.2.2] (inferred from 98% identity to pba:PSEBR_a1196)

Predicted SEED Role

"Carbamate kinase (EC 2.7.2.2)" in subsystem Arginine Deiminase Pathway or Arginine and Ornithine Degradation or MLST or Polyamine Metabolism (EC 2.7.2.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.2.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165ZBS6 at UniProt or InterPro

Protein Sequence (309 amino acids)

>Pf6N2E2_2910 Carbamate kinase (EC 2.7.2.2) (Pseudomonas fluorescens FW300-N2E2)
MRIVVALGGNALLRRGEPMTADNQRINIRTATEQIAKIHPGNQLVIAHGNGPQVGLLSLQ
AAAYTSVTPYPLDVLGAETEGMIGYIIEQELGNLLDFEVPFATLLTQVEVDGNDPAFQKP
TKPIGPVYSQEEAQKLAAEKGWAIAPDGDKFRRVVASPRPKRIFEIRPIKWLLEKGSIVI
CAGGGGIPTMYDADGKLQGVEAVIDKDLCSALLAEQLESDLLVIATDVNAAFIDFGKPTQ
KAIAQAHPDEMEKLGFAAGSMGPKVQAACEFARNTGKVAVIGSLSDIDAIVLGKAGTRIS
TATPGIAYR